| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1402 |
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| Symbol | |
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| ID | 7389129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1180977 |
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| End bp | 1182581 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650800 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002549006 |
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| Protein GI | 222148049 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.536477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGA CCGAAAACCA GACGGTGCTG ACCGTCAAGG ACCTGAAGGT CACATTCACC
ACGCCCGATG GCGAGGTGAA TGCCGTCAAG GGCATTTCCT TCGATGTCAA GAAAGGTGAA
ACGCTGGCCA TCGTCGGTGA ATCCGGCTCC GGCAAAAGCC AGACGATGAT GGGCATTATG
GGGCTTCTGG CCTCGAATGG ACAGGTGGCA GGCTCGGCTC GCTACGGCGA AACCGAACTG
GCAGGTGCCA GTATCTCGAC GCTGAACGAC GTGCGCGGCT CGAAGATCAC CATGATCTTT
CAAGAGCCAA TGACCTCACT CGATCCGCTC TACACGGTCG GCAAGCAGAT TTCCGAGCCG
TTGATTTTTC ATCGCCGCAT GAGCCGGTCG AAGGCGCGCG CCCGCGTGCT GGAATTGCTC
AAGCTGGTCG GCATCCCGGA ACCGGAGCGT CGGATCGACA GCTACCCCCA TGAATTGTCC
GGCGGCCAGC GCCAGCGCGT GATGATCGCC ATGGCGCTCG CCAATGAGCC GGACCTGCTG
ATTGCCGACG AGCCGACCAC GGCGCTGGAC GTAACGATCC AGGCGCAGAT CCTCGATCTT
CTCGCCGATT TGCAAAAGCG CTTCGGCATG GCCATCGTGT TGATCACCCA CGACCTCGGT
GTGGTCAAGC ATGTTGCCGA CCGAGTGGCG GTCATGCGGC GCGGCGAAAT TGTCGAACAG
GGCAGCCGGG ACGATATTTT CGACCGCCCG CAGGCCGATT ACACCAAGAT GCTGCTGGCC
GCCGAACCAT CAGGCTCCAA GGCCGCACCG CCCTCCGATG CGCCGGTCAT TCTCGAAGGC
CGCAATGTCG TGGTGGATTT CAACATCAGC TCCGGCATCC TGTTCAAGGG CAATCGAAAA
TTCCGGGCCG TCGATCATGT CAATCTGAAG CTTCGCCAGG GCCAAACCAT TGGCATTGTC
GGCGAATCCG GTTCGGGCAA ATCCACGCTG GGACGGGCGC TGCTAAAGTT GCTCTCCGCC
GATGGCCGGT TCAGCTTCGA GACCACGGAT ATTTCCGGCC TTGACCGCGC CGGGATGCGT
CCCTTCCGTC GTCAATTGCA GCTGGTGTTT CAGGATCCCT ACGGCTCGCT CTCGCCCCGC
CAGACGGTCG GCGAGATCAT CACCGAAGGG CTTTACGTGC ATGAGCCTGA TCTTAGCAAG
GCGGAACGCG ACAAGCGTGC CATTGCCGCC TTGAAGGAAG TCGGCCTCGA TCCCGCCTCG
CGCAATCGCT ATCCGCATGA GTTTTCCGGC GGCCAGCGTC AGCGTATCGC CATCGCCCGC
TCGATGATCC TCAAGCCGAA AGTGGTAATC CTTGATGAAC CGACCTCGGC CCTGGACCGT
TCGGTGCAGC GGCAGGTGAT CGAGTTGCTA CGCGACCTGC AACAGAAACA CGACCTGTCC
TACGTGTTCA TCAGCCACGA TCTGTCGGTG ATCAAGGCGA TTTCCGACCA TGTGATCGTG
ATGAAGAACG GAAAGATCGT TGAAGAAGGG CCGACGGAAG ACATTTTCGA AAGCCCCGCC
GAGGACTATA CCAAGGCCCT GATTGCGGCT GCGTTTACGC ATTGA
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| Protein sequence | MDKTENQTVL TVKDLKVTFT TPDGEVNAVK GISFDVKKGE TLAIVGESGS GKSQTMMGIM
GLLASNGQVA GSARYGETEL AGASISTLND VRGSKITMIF QEPMTSLDPL YTVGKQISEP
LIFHRRMSRS KARARVLELL KLVGIPEPER RIDSYPHELS GGQRQRVMIA MALANEPDLL
IADEPTTALD VTIQAQILDL LADLQKRFGM AIVLITHDLG VVKHVADRVA VMRRGEIVEQ
GSRDDIFDRP QADYTKMLLA AEPSGSKAAP PSDAPVILEG RNVVVDFNIS SGILFKGNRK
FRAVDHVNLK LRQGQTIGIV GESGSGKSTL GRALLKLLSA DGRFSFETTD ISGLDRAGMR
PFRRQLQLVF QDPYGSLSPR QTVGEIITEG LYVHEPDLSK AERDKRAIAA LKEVGLDPAS
RNRYPHEFSG GQRQRIAIAR SMILKPKVVI LDEPTSALDR SVQRQVIELL RDLQQKHDLS
YVFISHDLSV IKAISDHVIV MKNGKIVEEG PTEDIFESPA EDYTKALIAA AFTH
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