| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1401 |
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| Symbol | |
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| ID | 7389128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1180059 |
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| End bp | 1180913 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650799 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549005 |
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| Protein GI | 222148048 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCT ATTGCGCGCG TGCCGAGCAA ATCTTCCACG ATGCTGGCCA TGAGATCGAA
ACTATGGCTG TTGATGGCCG TGATATCGTC AAGACACTCG AGGGCGCTGC AAAGCAAGGA
TATGACGCGC TGATCGCCGG TGGTGGCGAC GGGACCATAT CGACAGCCGC CGGCATTGCC
TGGAAAGCCG GTCTGCCGCT CGGCGTTGTG CCCGCCGGAA CAATGAACCT GTTTGCACGC
TCACTGAAAC TGCCGCTCGA TATCTGGCAG GTTCTGGAGG TGCTGGCATC GGCGGAGGTC
CAGTCCGTCG ACATCGCCAC CGCCAATGGG CAGCCTTATG TCCACCAGTT CTCCGCTGGT
CTGCACGCCC GCATGGTCCG CCTGCGCAAC CGGATGGACT ATGCGTCGCG CTTCGGCAAG
ATGCGGGCCA GCACCAGCGC TGCGATCAGC GTGATGTTCA ATCCGCCCCG CTTTGACGTC
GTTTTCGATA TCGACGCCGA TGGACGGCAG GATAGCAAGG AAGTGTCAGC CGTTTCGGTC
TGCAACAACC CGGTTGGAAC CAACCCGTTG TTTTATGCCG ATGATATTAC CACCGGCCAA
CTCGGGATCT ATCTTGCAGC TCCACTCGAT TCTGTCGGAT TGGTGGGGTT GGCGATTGAT
ATTCTGCGCG GCAAGCTCAC GGAAAACCAG GCCGTCACGT CGGCCACCTC ACAAATCGTT
AAACTGCATT TCCCAAAACA TCGCCACGGT GTTGCCTGCG TGATTGATGG AGAACTGCTG
CGGATGCCCC GCGATGTAGA GATCAAAATC CATCCAGGCG AATTAAAAGT CTTGGCGCCC
GCCCTTTCGG CATAG
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| Protein sequence | MDAYCARAEQ IFHDAGHEIE TMAVDGRDIV KTLEGAAKQG YDALIAGGGD GTISTAAGIA
WKAGLPLGVV PAGTMNLFAR SLKLPLDIWQ VLEVLASAEV QSVDIATANG QPYVHQFSAG
LHARMVRLRN RMDYASRFGK MRASTSAAIS VMFNPPRFDV VFDIDADGRQ DSKEVSAVSV
CNNPVGTNPL FYADDITTGQ LGIYLAAPLD SVGLVGLAID ILRGKLTENQ AVTSATSQIV
KLHFPKHRHG VACVIDGELL RMPRDVEIKI HPGELKVLAP ALSA
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