Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1392 |
Symbol | |
ID | 7389121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1170115 |
End bp | 1171776 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650792 |
Product | electrotransfer ubiquinone oxidoreductase |
Protein accession | YP_002548998 |
Protein GI | 222148041 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) [COG2440] Ferredoxin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC AAGAGCTGCC CGAGCGCGAG AGCATGGAAT TTGACGTGGT GATTGTTGGG GCAGGGCCTG CGGGCCTATC GGCTGCCATT CGCCTCAAGC AGGTCAATCC CGATCTGACG GTTGTCGTGC TGGAAAAGGG TGCGGAAGTC GGCGCCCATA TCCTCTCCGG GGCTGTGGTC GATCCGGTTG GCGTCGATAA GCTTCTCCCG GATTGGCGCA AGGAAGCCGA TCATCCGTTC AAGACCGAAG TCACCGCCGA CCATTTCCTG TTTCTCGGTC CCGCAGGCTC CATTCGCCTG CCCAACGCCC TGATGCCGCC GCTGATGAAC AATCACGGCA ATTACATCGT CTCGCTCGGC AATGTCTGTC GGTGGCTGGC GGGCCATGCC GAGGCGCTGG GCGTCGAGAT CTACCCGGGC TTTGCCGCCA CTGAACTGCT TTATAATCAG GCTGGCGCGG TGATTGGTGT TGCCACCGGT GATATGGGCA TCGAGAAGAA CGGCGAACCC GGTTCCAGTT ACACGCGCGG CATGGAATTG TTGGGCAAAT ATGTGCTGAT CGGCGAAGGC GTGCGTGGCT CGCTTGCCAA GCAGTTAATC GCCAAATTCG ATCTGTCACG CGAGAGCGAT GTGCAGAAAT TCGGCCTCGG CATCAAGGAA CTGTGGCAGG TCAAGCCTGA GCACCATAAG CCCGGCCTGG TCCAGCACTC ATTCGGCTGG CCACTGGACA TGAAAACCGG TGGCGGCTCC TTCCTCTATC ATCTCGAGGA TAATCAGGTC GCGGTCGGCT TTGTCGTGCA TCTGAACTAC AAGAACCCCT ATCTCTATCC CTTCGAGGAG TTCCAGCGCT TCAAGACCCA TCCGGCGATC CGTGAAACCT TTGAGGGTGC TAAACGGATT TCCTATGGAG CGCGGGCGAT TACCGAAGGC GGCTATCAGT CGGTGCCGAA ATTGTCCTTC CCCGGTGGGG CGCTGCTGGG CTGTTCGGCG GGCATGGTCA ACGTGCCGCG CATCAAGGGC AGCCATAATG CCGTTTTGTC GGGGATGATG GCGGCGGAAA AGATTGCCGA GGCAATTGCG GCGGGTCGCG CCAATGATGA GCCGGTCGAG ATCGAAAACA GCTGGCGCGG CATTGAAATC GGCACGGATT TGCGGCGGGT GCGAAACGTC AAGCCGCTGT GGTCGAAACT CGGCACGGTG CTGGGCGTGG CGCTGGGTGG GCTGGATATG TGGACCAACC AGCTTCTCGG CTTTTCTGTC TTCGGCACGC TGAAACATGG CAAGACCGAT GCTGAGAGCC TTGAACCTGC TGCAAAGCAT AAGAAGATCG ACTATCCCAA GCCGGATGGC GTGCTGACCT TCGACCGCCT GTCCTCGGTG TTTCTGTCCA ACACCAATCA CGAGGAAGAC CAGCCGGTGC ATCTGAAGGT CAAGGACATG GCGCTGCAAA AGTCCTCCGA GCTTGGCGTC TATGCCGGTC CGTCCAGCCG CTACTGTCCC GCCGGGGTTT ATGAATGGGT GGAGAAGGAG GGCGAGCCGA GTTTCGTCAT CAACGCCCAG AACTGCGTCC ACTGCAAGAC CTGCGACATC AAGGACCCGA ACCAGAACAT CACCTGGGTG CCGCCACAAG GAGGCGAAGG ACCGGTTTAC CCGAACATGT AA
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Protein sequence | MSEQELPERE SMEFDVVIVG AGPAGLSAAI RLKQVNPDLT VVVLEKGAEV GAHILSGAVV DPVGVDKLLP DWRKEADHPF KTEVTADHFL FLGPAGSIRL PNALMPPLMN NHGNYIVSLG NVCRWLAGHA EALGVEIYPG FAATELLYNQ AGAVIGVATG DMGIEKNGEP GSSYTRGMEL LGKYVLIGEG VRGSLAKQLI AKFDLSRESD VQKFGLGIKE LWQVKPEHHK PGLVQHSFGW PLDMKTGGGS FLYHLEDNQV AVGFVVHLNY KNPYLYPFEE FQRFKTHPAI RETFEGAKRI SYGARAITEG GYQSVPKLSF PGGALLGCSA GMVNVPRIKG SHNAVLSGMM AAEKIAEAIA AGRANDEPVE IENSWRGIEI GTDLRRVRNV KPLWSKLGTV LGVALGGLDM WTNQLLGFSV FGTLKHGKTD AESLEPAAKH KKIDYPKPDG VLTFDRLSSV FLSNTNHEED QPVHLKVKDM ALQKSSELGV YAGPSSRYCP AGVYEWVEKE GEPSFVINAQ NCVHCKTCDI KDPNQNITWV PPQGGEGPVY PNM
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