| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1385 |
|---|
| Symbol | |
|---|
| ID | 7389116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1162675 |
|---|
| End bp | 1163967 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643650787 |
|---|
| Product | molecular chaperone Hsp70 family |
|---|
| Protein accession | YP_002548993 |
|---|
| Protein GI | 222148036 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.23815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACG CGCTTGGGCT TGATTTCGGC ACGACCAACA CGGTCCTGGC ACAGAGCATC
GACGAGACCA CCACCCATTC GGTGCAATTC ACCTCCATGG CCGGAACCAC CGACAGCATG
CGCACGGCGC TGTCCTTCAT GAAGGATGCC CAGCTTGGCG CGCGTGCCCT GAAGGTGGAG
GCCGGGCAAG CCGCCATTCG CCAGTTCATC GACAATCCCG GCGATTGCCG TTTCCTGCAA
TCGATCAAGA CCTTTGCCGC CTCGGCACTG TTTCAGGGTA CGCTGGTCCA TGCACGGCGG
TTTCAGTTCG AAGACCTGAT GGAAGTGTTC CTGAAACGGC TGGAAACCTA TGCTGGCGAT
GGTTGGCCTG CGACTGCCAG CCGCATCGTC GCGGGCCGGC CCGTGCATTT CGCTGGCGCC
TCCCCCGATC CCGAGCTTGC CATGCGCCGC TATAACGAAG CACTCACCCG GCTCGGCTTT
CCGGAAATCC ATTATGTCTA TGAGCCGGTG GCCGCGGCCT TCTATTTCGC CCAGCACCTG
ACGACAGATG CCACCGTGCT GGTCGCCGAC TTCGGCGGCG GCACCACCGA CTATTCGCTG
ATCCGGTTCG AGCGCAAGGC AGGCGTGCTG TCGGCAGTAC CAGTCGGCTA TTCCGGCGTC
GGATTGGCCG GTGACCAGTT TGATGCGCGG ATCATCGAGC ATCTGGTGGC ACCTGAAATT
GGCAAGGGCA GCCAGTTCAA GAGTTTCGAC AAGATCCTGG ATATTCCAAG CAATTATTAC
ACCAGCTTTT CGCGCTGGAA CCAGCTGTCG GTGTTCAAGT CCTCAAAGGA ATTCGCCGAT
CTGAAACAAT TGGTACGCCA AAGCCTCGCC CCCGACAAAC TGGAGCTGTT TATCGACCTG
GTCGAGCATG ACGAAGGCTA TCCGCTCTAC CAGGCGGTAT CCTCCACCAA AATGGCGCTG
TCTGCGGCGG ATGAAGCGGA ATTCAACTTC TCGCCACTTG GCGCGGCTGG CCGCAAGACC
GTCAAGCGCC AGGATTTCGA GAGCTGGATT GCCGACGATC TCACACGCAT CGAATCGGCA
CTCGATGATG TTCTCACCCG GACAAACACC GAGGCAGGCG CCGTGGATAA GGTGTTTCTG
ACCGGCGGCA CATCCTTCGT TCCGGCAGTT CGACGGATCT TCACCGAGCG CTTCAGCCAG
GACCGAATCG AGAGCGGCGG CGAAATGGTA TCGATTGCCC ATGGACTGGC GCTGATTGGC
GACCGCGACG ATATTGCTCT TTGGACCGCA TAA
|
|---|
| Protein sequence | MANALGLDFG TTNTVLAQSI DETTTHSVQF TSMAGTTDSM RTALSFMKDA QLGARALKVE
AGQAAIRQFI DNPGDCRFLQ SIKTFAASAL FQGTLVHARR FQFEDLMEVF LKRLETYAGD
GWPATASRIV AGRPVHFAGA SPDPELAMRR YNEALTRLGF PEIHYVYEPV AAAFYFAQHL
TTDATVLVAD FGGGTTDYSL IRFERKAGVL SAVPVGYSGV GLAGDQFDAR IIEHLVAPEI
GKGSQFKSFD KILDIPSNYY TSFSRWNQLS VFKSSKEFAD LKQLVRQSLA PDKLELFIDL
VEHDEGYPLY QAVSSTKMAL SAADEAEFNF SPLGAAGRKT VKRQDFESWI ADDLTRIESA
LDDVLTRTNT EAGAVDKVFL TGGTSFVPAV RRIFTERFSQ DRIESGGEMV SIAHGLALIG
DRDDIALWTA
|
|---|
| |