| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1379 |
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| Symbol | |
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| ID | 7389112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1157341 |
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| End bp | 1158294 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650783 |
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| Product | permease |
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| Protein accession | YP_002548989 |
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| Protein GI | 222148032 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.139732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGTG AAGTATCGGC GGGTCCGATC AGAGGCCCGA TCAGAGGCAT TGTGTTCAAG
GTCGCTTCTG TTACGGTCTT TGTTGCCATG CAGACAGCGA TTAAACTGGC AGGTGATGAC
GTGCCCGCAG GACAGATCAC TTTCTATCGC TCCGCCTTCG CGCTCATCCC CATCCTGGCC
TATCTTGCCT ACCTGGGACA GATCAGGACC GGCTTGAGGA CGGCTAATGT GTTCGGGCAT
GTGAAGCGCG GGCTGATTGG CATCGCCGCC ATGGCCTGCG GCTTTTACGG CCTCGTGCAT
CTGCCGATGC CGGATGCTAT TGCCATCGGT TATGCCATGC CGCTGATCGC CGTGGTGTTT
GCTGCGGTTT TCCTGGGCGA GACCGTCAGG CTCTATCGCT GGTCGGCGGT TGCCATCGGC
CTTGTCGGTG TGGTGATTAT TTCCTGGCCG AAGCTGACCC TGTTGCAGGA CGGGTTTTAT
GGTTCCGAGG TTGGCATGGG GACGCTTGCC GTGCTCGCCT CCGCTACGCT TGGAGCCGCA
GCGATGTTGC AGGTCCGCCA ACTCGTTCGT GAAGAAAAAA CGGCCACGAT CGTGTTGTAT
TTCTCGATCA TTGCGGCGCT GATATCGCTT GTCAGTCTGC CATTCGGCTG GAACGATCTT
TCTGCCCGCC AGCTAGGTCT CCTGGCCTTT GCGGGGATCT GCGGCGGCCT CGCCCAGATT
TTGCTGACGG AAAGCTACCG CCATGCCGAT ATTTCGACAA TTGCGCCGTT CGAATACAGC
TCCATCCTGT TTGGCTCGTT GATTGGCTAT CTGCTGTTTG ACGACCTTCC GAGCATTCAC
ACCCTGGTCG GCACGCTGAT CGTGGCGGGT GCGGGAATTT TCATCATCCT GCGCGAGCAT
CAATTGGGGC TGGAGCGCCG TGCGGCGCGC AAGGCATCCA CCCCTGGTGT CTGA
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| Protein sequence | MNSEVSAGPI RGPIRGIVFK VASVTVFVAM QTAIKLAGDD VPAGQITFYR SAFALIPILA
YLAYLGQIRT GLRTANVFGH VKRGLIGIAA MACGFYGLVH LPMPDAIAIG YAMPLIAVVF
AAVFLGETVR LYRWSAVAIG LVGVVIISWP KLTLLQDGFY GSEVGMGTLA VLASATLGAA
AMLQVRQLVR EEKTATIVLY FSIIAALISL VSLPFGWNDL SARQLGLLAF AGICGGLAQI
LLTESYRHAD ISTIAPFEYS SILFGSLIGY LLFDDLPSIH TLVGTLIVAG AGIFIILREH
QLGLERRAAR KASTPGV
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