| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1372 |
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| Symbol | glnE |
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| ID | 7389108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1147159 |
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| End bp | 1150170 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650779 |
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| Product | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase |
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| Protein accession | YP_002548985 |
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| Protein GI | 222148028 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCATGC CCAAGGACCA GCCCGTTTCG CCGGAAACCG TGTTTCTGCG CGATGTCGCC
GAAGACGTCG TCAAACCGCT GAACAAAGTG GAGACCAAGG CTGTCCTTGC TGTGCTGAAG
GAGCTTGGCA GGGACACGCC TGAGATCGCA GCCTTGCTTT CGGATGAGAC GCCGCTCAAA
TCCTTCATTA TCGCCGCCCT GACGCTTTCG CCTTATCTGC GTGAGACGGC GGCGCTGCGT
CCTGATTTGC TTGTGCGCGC GCTGCATGCC CCTTTGGAGG CGAGCCTGAA CGGGTTGGTG
GAGCATGCGC GCTATGCCTG GCGACCGGAG CAGGGAAGAG TGCCGCCAAC CGAGGCCATG
GTGATGAGCC GGTTGCGTCA GGCCAAGCGG GGCCTGTCTT TTTTGCTGGC ACTGGCCGAT
CTGGGCCGAT TGTTTCATCC CCGCCAGACG ACGCTATGGC TGTCGCGAAT GGCGGATGCG
GCAATCGCCT GCGCCATCGA CCATCTTCTG CTGGCGGGTC ATGAGGCGGG CAAGTTGCGG
CTTGCCGACC GCGACGCGCC ATCGAAACAC AGCGGCCTGA TCGTGCTGGG CATGGGCAAG
CTTGGCGCGT TTGAGCTGAA CTATTCGTCG GACATCGATC TCGTGGTGTT TTTCGAGCCG
GATGCGGCAA TCCTGGTTGC GCCCGAGGAA GCAACCGAAA CCTATGGCCG GATGATGCGC
CGGTTGATCC GCATTCTGCA GGAGCGCACC GGTGATGGCT ATGTGTTCCG CACCGATTTG
AGGCTGAGGC CCGATCCGGG GGCCACACCG CTTGCCATGC CGGTTGAGGC AGCGCTGATT
TATTATGAGG GACGTGGGCA AAACTGGGAG CGGGCCGCCT TTATCAAGGC CCGGGCGCTG
GCAGGGGATC TTGCCGCCGG TCAGGCCTTT CTCAAGGAAT TGGCACCTTT CGTGTTTCGA
AAATATCTCG ATTATGCGGC GATTGCCGAT ATTCACTCGA TCAAGCGGCA GATCCATAGC
CACCGGGGCC ACGGTGCGAT TGCGGTCAAG GGCCACAATA TCAAGCTTGG GCGCGGCGGC
ATTCGCGAGA TCGAATTTTT CGCCCAGACA CAGCAATTGA TCGCTGGTGG ACGGATGCCG
GATCTGCGGG TGCGCGGCAC CGAGGCAGCG CTGGCGGCGT TGGAACAGGC CCGCTGGATC
GATGCGACTA CCCGCGATGA GCTAACGGAG GCCTATTGGT TTCTGCGTGA TGTCGAGCAT
CGCATTCAGA TGGTGCATGA CGAGCAGAAC CACACGCTGC CGACCACGGA GGCCGAGTTG
AAGCGCATCG CGCTGATGTG CGGTTTCGAC ACACCGGCAG GCTTTTCGCA AGCCCTGGAA
AAACGGCTGC GGCTGGTGGA GCGGCGTTAC GGTCAGTTGT TTGAACAGGA AGATGATCTT
TCTGTGGGCG GCAATTTGGT GTTTACCGGT CAGAAGGATG ATCCCGATAC GCTGAAGACC
CTGGAAAAGC TCGGTTTTCA GCGACCTGAA GACATTTCGC GAGTGATCCG CACCTGGCAT
TACGGACGCT ACCGGGCCAC GCAGTCGGTG GAGGCGCGTG AACGGTTGAC GGAACTGACC
CCGCGTCTCC TTAAGGCATT TGGCGAAAGC CGTCGCGCCG ATGAGGCGCT GTTGCGGTTC
GATGCATTCC TGTCGGGCCT TCCCGCCGGC ATCCAGCTGT TTTCGCTGCT TGGCAACAAC
CCGGCCCTGC TGGAACTGAT CGTTACCATC ATGGCCGCCG CGCCCCGGCT TGCCGCCACC
ATTGCCAGCC GCCCGCATGT TTTTGATGGC ATGCTCGACC CCGGTCTGAT GGCCGATCTG
CCGACACGCG ATTATCTCGC CATGCGGCTC GATGCTTTTA TTGGCGGTGT TTCGAACCAC
GAGGAATTGC TGGACCGCCT GCGGATCTTT GCCGCCGAGC AGCGTTTCCT GATCGGCATT
CGCCTGATGA CCGGGGCAAT TTCCGGAACG GTGGCAGGTC ATGCGTTTAC CGATCTCGCC
GATCTGGTGA TCGAGCAGGC CTTTCACGCA GTGTGCCGCG AAATGGAACG GGTCCATGGC
CGGATCAAAG GTGGCCAACT GGCACTGGTG GGCATGGGCA AGCTCGGCTC GGGTGAGCTG
ACGGCAGGCT CTGACGTCGA TCTGATCGTG CTTTATGAGT ATGACGAGGA TGCAGGAGAC
AGTGGCAGGG AGGGCGATGG CGTAAAGCCA CTCGATCCCG TGCGCTATTA TACCCGCCTG
ACCCAGCGGT TGATTGCCGC GTTATCCGCG CCAACCGCCG AAGGTGTGCT CTATGAAGTG
GATATGCGGC TGCGTCCTTC CGGCAATAAG GGGCCAGTGG CAACGCGGCT TCGAGCGTTC
GAGCGCTATC AGCGTGAGGA GGCCTGGACC TGGGAGCATA TGGCACTGAC TCGCGCCCGG
CTGATCACCG GCGATGGCCC ACTGGTTGCA AGGGCTGAAA CCATCATTGC CGATGTTCTG
GCACTGAAAC GCGACCGCGC TGCGATTGCT GCCGACGTCA GCGAGATGCG CGGCATGATC
GATAGCGAAA AACCGCCGAA GGACGGATGG GACTTGAAGC TCATGCCGGG CGGATTGGTG
GATCTGGAGT TTCTCGCCCA ATATCTTGCC CTGGTGGCTC CGAACGATAG ATTGAAAGCG
CTGGCCGGGC CGGGATTTTC ACAGACGGAT ATCACCACTG TCCAGCGTTT GAAACAGGGC
GGGGGGCGGG TGATGGAGGC CGGTGATCTC GATCTCTGCC TTGCGGCCCT CACGCTCTAC
ACAGAACTGT CGCAGGCAAT CAGGGCTTGT GTCGAGGGAG GATTCAGGCC GCAGGATGCA
CCGGCGGGCC TGATCGATGT CGTCCTGCGG GTTGCCGATT GCCCGGACCT GAAAGTGCTG
GAGGCCGAGT TGAAACGCCT GTCCAAGGCG GTTCGGCGGA TTTTTCAGAC GGTTGTCAGC
ACCCGGCCCT GA
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| Protein sequence | MCMPKDQPVS PETVFLRDVA EDVVKPLNKV ETKAVLAVLK ELGRDTPEIA ALLSDETPLK
SFIIAALTLS PYLRETAALR PDLLVRALHA PLEASLNGLV EHARYAWRPE QGRVPPTEAM
VMSRLRQAKR GLSFLLALAD LGRLFHPRQT TLWLSRMADA AIACAIDHLL LAGHEAGKLR
LADRDAPSKH SGLIVLGMGK LGAFELNYSS DIDLVVFFEP DAAILVAPEE ATETYGRMMR
RLIRILQERT GDGYVFRTDL RLRPDPGATP LAMPVEAALI YYEGRGQNWE RAAFIKARAL
AGDLAAGQAF LKELAPFVFR KYLDYAAIAD IHSIKRQIHS HRGHGAIAVK GHNIKLGRGG
IREIEFFAQT QQLIAGGRMP DLRVRGTEAA LAALEQARWI DATTRDELTE AYWFLRDVEH
RIQMVHDEQN HTLPTTEAEL KRIALMCGFD TPAGFSQALE KRLRLVERRY GQLFEQEDDL
SVGGNLVFTG QKDDPDTLKT LEKLGFQRPE DISRVIRTWH YGRYRATQSV EARERLTELT
PRLLKAFGES RRADEALLRF DAFLSGLPAG IQLFSLLGNN PALLELIVTI MAAAPRLAAT
IASRPHVFDG MLDPGLMADL PTRDYLAMRL DAFIGGVSNH EELLDRLRIF AAEQRFLIGI
RLMTGAISGT VAGHAFTDLA DLVIEQAFHA VCREMERVHG RIKGGQLALV GMGKLGSGEL
TAGSDVDLIV LYEYDEDAGD SGREGDGVKP LDPVRYYTRL TQRLIAALSA PTAEGVLYEV
DMRLRPSGNK GPVATRLRAF ERYQREEAWT WEHMALTRAR LITGDGPLVA RAETIIADVL
ALKRDRAAIA ADVSEMRGMI DSEKPPKDGW DLKLMPGGLV DLEFLAQYLA LVAPNDRLKA
LAGPGFSQTD ITTVQRLKQG GGRVMEAGDL DLCLAALTLY TELSQAIRAC VEGGFRPQDA
PAGLIDVVLR VADCPDLKVL EAELKRLSKA VRRIFQTVVS TRP
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