| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1362 |
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| Symbol | cycH |
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| ID | 7389101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1138638 |
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| End bp | 1139786 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650772 |
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| Product | cycH protein |
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| Protein accession | YP_002548978 |
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| Protein GI | 222148021 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTCT GGGTTGAAAT TGCTGTTCTG ACCTTTGCCG TTGCTGCGGC CTTTTTATTG
CCGCTGACAC GGGCGCAGCA GCGTGGCGAG CGTGAGACCC GCGATGGTGC GATGGCCGTC
TATCGTGATC AATTGCAGGA ACTGGAGCGT GACCGGGCGG GCGGGTTGAT TTCCGCCGAG
CAGGTGGATT ATGCCCGAGC TGAGATTGCC CGCCGCCTTC TGGCCGCCGA TAAGGGTGAT
GAAACTCAGG CGGTCAAAAG TGCGCCTCGC AAAACCTCGC GCAATGGTCT GGCGCAGGCC
TTCGTTGTTC TGCTGGTACC AGCAGTCGGC CTTGGGCTTT ATCTTGCCCT CGGCAGTCCC
GGCCTGCCAT CACAACCCTT GCAGGCCCGG TTGGAAAATC CCGGCAATGA CATGAGCCTG
TTGATTGCCC AGGCCGAGCG CCATCTGATG CAAAAGCCTG ATGATGGTGC AGGCTGGGAT
GTGCTGGCTC CCATCTATCT GCAACAAAAC CGCATGGGCG AGGCGGAACT GGCCTTTCGC
AACGCCATCC GGTTGAAGGG CGCCAGCCCC GAGCGGCTCA ACGGGCTTGG CGAAGCGCTG
ATTGCTCAGA GCGACGGCGT GGTGACCGAT GCCGCCCGTG ATCTGTTTTC GCAATCCGTG
GCGCTGAATC GCGACAATCC GCGTGCCGCC TATTATCTGG CGCTGGCGCT GGAGCAATCC
GGCAAACGCG ACGAGGCGCT GGCCGCTTTC AAGGCGATTG CGGCTCAATC ACCGCCCAAT
GCGCCGTGGC TGCCGCTGGT CGCCCGCCAT ATCGCCCGTA ATGGTGCGGA TGCTGCTGCA
ATGCCTGCAC CCCTTGGAAA TCCGGATGCT GCCACCGTGG CCGCAGCCCA GGGCTTGCCG
GACGGCGACC GTCAGGCGAT GATAAAGGGC ATGGTTGAAA GCCTGGATGC CAAGCTGAAA
GCCGATCCGA ATAATTTTGA AGGCTGGGTG CGGCTGGTGC GCTCCTATAC GGTGTTGAAG
GACAACCAGC GGGCGCTCGA AGCCTTGAAA GCCGGATTGA AGACCTTCCC GGCCGAGGGG
GAGCAAGGCA AGCAGCTGAT CGCCATGGCG CAGCAATTGG GATTGCCGGT CGAGGAGGCG
CTGAAATGA
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| Protein sequence | MLFWVEIAVL TFAVAAAFLL PLTRAQQRGE RETRDGAMAV YRDQLQELER DRAGGLISAE
QVDYARAEIA RRLLAADKGD ETQAVKSAPR KTSRNGLAQA FVVLLVPAVG LGLYLALGSP
GLPSQPLQAR LENPGNDMSL LIAQAERHLM QKPDDGAGWD VLAPIYLQQN RMGEAELAFR
NAIRLKGASP ERLNGLGEAL IAQSDGVVTD AARDLFSQSV ALNRDNPRAA YYLALALEQS
GKRDEALAAF KAIAAQSPPN APWLPLVARH IARNGADAAA MPAPLGNPDA ATVAAAQGLP
DGDRQAMIKG MVESLDAKLK ADPNNFEGWV RLVRSYTVLK DNQRALEALK AGLKTFPAEG
EQGKQLIAMA QQLGLPVEEA LK
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