| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1359 |
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| Symbol | popQ |
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| ID | 7389099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1136334 |
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| End bp | 1137749 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650770 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548976 |
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| Protein GI | 222148019 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.316901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCCGGG TCAACTCTCT CACCCTTCGC GTCCTGCTGT CAGCCACTCT CTGGTATATC
ATCGCGCTGG TCACCATGGC TGTGGTGATT TCGGCGCTCT ATCGGCAGGG GGCAGAGCGC
TCCTTCAACG ATCTGTTGCG CGCCCAGCTC TATAATGTCG TCAATTCCGT CACGGTGGGC
GATGGTGAAA GCCTGTCTGG CAGTCCGGCG CTCGGTGATC TCAGGTTTTC GCAACCCGGA
ACCGGCTGGT ACTGGCTGGT TGAGCCGCTC GGCTCCTTCA ATGCCGCGCC GCTGGCCTCC
ACCTCATTGG GGTTGACCAA TCTGCCGGTG CCAAGCTTTG AGGAAAGCCC CTTCGACCAG
AATTACGAGC GGTTTTACGG CATGACAGAC AGTTTCGGCA ACCGGCTGCG GATCGCCGAG
ACCGAGGTTA TCCTGGATGA ATCTGGCCGT GCGGCGCGGT TCCGGGTATC GGGCAATCTG
AAAGTGGTGG AAGACGAAAT TACCGGATTT TCCCACCGGC TTTACGCCGT TCTGGCGATG
TTCGGGGTCG GCGGCCTGCT GGTCAATGCC GTTACTATTA TCTTCGGCCT GAAGCCGCTG
GATCGGGCGC GTCGGGCGCT GGAGCGCATC AGGGGCGGCG AGGCTGAGCG GATCGAGGGA
GAGTTCCCCC GCGAAATCGA GCCATTGGCC AATGAGATCA ACGCCTTGAT CGATAGCAAC
CACCGCATTG TCGAGCGCGC CCGCATGCAG GTCGGCAATC TCGCCCATTC GTTGAAAACT
CCTATTGCCG TGCTGCTCAA CGAGGCGCGG GTGCTTGATC CGCCGCATGG CGAGGTCATC
AAGGCCCAGG CGTCTGCCAT GCAGAGCCAG GTCGGCACCT ATCTCAACCG CGCCCGCATC
GCTGCCCAGC GCGAATCGGT GCTATCACGG GCTGAAGTGG AACCGGTTCT GGAGCGTCTG
GTACGGGTGA TGCGCAAGCT GAACCCGGAC AAGCAGTTCG AGGTTCACCT GGAGAGCCAA
GCCTCGGGGC AAGGCCTGGT TCTGGCGATG GAAAGCCAGG ATCTCGAGGA AATCCTTGGC
AATCTCCTGG AAAATGCTGC CCGGCACTCA GAAACCACTG TTACCGTGAC GGCCCGGATC
GCGCCGACCG GCGAGGTTGG GCTCGATCCG GGTCGTAGGG CCTGGCTGGA AATCATCGTC
GAGGATGACG GCCCGGGCCT TGACCCGGAC CAGATCGGCG AGGCGCTGAA GCGCGGTCGC
CGGCTGGACG AAAGCAAGCC CGGGACCGGG CTAGGCCTGT CGATTGTCAA GGAAATAACC
TCGGAATACC AGGGCAAGCT TGGCCTATCG CGCGGCGTCA ACGGGGGGCT GCTGGCCAGG
CTGGTTTTAC CGGCCCTGTC GCGGGACGGG GCGTGA
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| Protein sequence | MFRVNSLTLR VLLSATLWYI IALVTMAVVI SALYRQGAER SFNDLLRAQL YNVVNSVTVG
DGESLSGSPA LGDLRFSQPG TGWYWLVEPL GSFNAAPLAS TSLGLTNLPV PSFEESPFDQ
NYERFYGMTD SFGNRLRIAE TEVILDESGR AARFRVSGNL KVVEDEITGF SHRLYAVLAM
FGVGGLLVNA VTIIFGLKPL DRARRALERI RGGEAERIEG EFPREIEPLA NEINALIDSN
HRIVERARMQ VGNLAHSLKT PIAVLLNEAR VLDPPHGEVI KAQASAMQSQ VGTYLNRARI
AAQRESVLSR AEVEPVLERL VRVMRKLNPD KQFEVHLESQ ASGQGLVLAM ESQDLEEILG
NLLENAARHS ETTVTVTARI APTGEVGLDP GRRAWLEIIV EDDGPGLDPD QIGEALKRGR
RLDESKPGTG LGLSIVKEIT SEYQGKLGLS RGVNGGLLAR LVLPALSRDG A
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