| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1346 |
|---|
| Symbol | |
|---|
| ID | 7389089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1127579 |
|---|
| End bp | 1127998 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643650760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548966 |
|---|
| Protein GI | 222148009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000547988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGG GGACGGGGAA TGTTAGTATG GGCGTGCGCG CCAACCGCAG GCGCGGCGAA
GTGGAAGCGG TGATTGATGG CGAGCGGCGG ATTTTATGCC TGACGCTGGG CGCGCTGGCC
GAACTGGAAA CCGCCTTTGC CGCCGACAGT CTGGCGGATC TTGCCCTGCG GTTTTCCAGT
GGCAAGCTTT CCAGCCGCGA CCTGATCCGC ATTCTGGCGG TCGGTTTGCG GGGCGGCGGC
AATTGTTGCG CCGATGAGGA TGTCGCCGAC ATGTGCGTCG AGGGTGGGCT TGCGGCCTGC
GTCGCCATTG TCCGCGAATT GCTGCTCGTT ACGTTTGGAA CTGCTGATCA GGCGGCTTCG
ACCGGCCACA CCTCGACCGG CCACGCCCCG GCCATGGAGG GCGATCCCGC CCGCCCTTGA
|
|---|
| Protein sequence | MNGGTGNVSM GVRANRRRGE VEAVIDGERR ILCLTLGALA ELETAFAADS LADLALRFSS
GKLSSRDLIR ILAVGLRGGG NCCADEDVAD MCVEGGLAAC VAIVRELLLV TFGTADQAAS
TGHTSTGHAP AMEGDPARP
|
|---|
| |