Gene Avi_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1287 
Symbol 
ID7387658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1080909 
End bp1081274 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content59% 
IMG OID643650719 
Producthypothetical protein 
Protein accessionYP_002548925 
Protein GI222147968 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAA TGCCGCTTGA ACATCCTGTC CCGGTCAAAG CCTCCAGCCG GGTTCTGTGC 
CATTCCGTTG CCAGGGTTAC GGAGGAAATA TTTGTGGTTT TTCAGAGCCC GGGTCTCATA
AATGCCGGGC GCCGCCGTCA GCGCTGCCAT ATCCGCCAGA TCGCCATGTA TCTCTGCCAT
GTGGTGCTGA GCCTGCCACA GCAGGAAATC GCCCGCGCTT TCGGCTATGA CCGAAGCACG
GTATCCCATG CCTGCCATGT CATTGAGGAT CGGCGCGAAA ATGCCGCCCT CGACCAGTTT
CTCGGCGTTT TGGAACGGGT CGTCGCGGTG CTGTCGACGG TGGCCAAGGA TGGGCGCGAT
GCGTAA
 
Protein sequence
MSAMPLEHPV PVKASSRVLC HSVARVTEEI FVVFQSPGLI NAGRRRQRCH IRQIAMYLCH 
VVLSLPQQEI ARAFGYDRST VSHACHVIED RRENAALDQF LGVLERVVAV LSTVAKDGRD
A