| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1285 |
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| Symbol | mnhA |
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| ID | 7387656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1077357 |
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| End bp | 1079735 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650717 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_002548923 |
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| Protein GI | 222147966 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTG ATGCCGCCGG TATGACGCTG CTGGCTTTGG TCCTGCCATT TCTGGGTGCC
TGTCTGGCGC CCTGGCTGGT ACGGCGGCTT GGAAGCCGGG CGGCCTGGGT TCTGGCGCTT
CTGCCGCTAT TATCCTTCGT GCATTTCCTC GGCTTCCTGC CGGAAATCGC CAATGGCGAG
GAAGTGACGG GCGGCTATGC CTGGGTGCCG AGCTACAATG TCAGCTTTTC CTGGTTTCTC
GACGGATTGT CCCTCACTTT CGCGCTGCTG ATTACCGGCA TCGGCACGCT GATCGTGCTC
TATGCCGGCG GCTATATGAA GGGTCATCCG CAGCAGGGCC GGTTTCTGTC CTTCCTGCTG
TTGTTCATGG GCGCCATGCT GGGCGTGGTG ATGTCAGACA GTTTCCTGAT GCTGTTCATC
TATTGGGAAC TGACCTCAAT CACCTCCTTC CTGCTGATCG GTTTCAACCA TGAACGCCCG
GCTGCGCGCC GTGCCGCGCT GCAAGCGCTG GTGATCACCG GCGGCGGCGG CCTTTTGCTG
CTGGCCGGTT TGATCCTGCT GTGGAACGTG TCGGGCGTCA CGCAATTGTC GATGCTGATG
CATAGCAACA ATATGGTCAC CGCCAGCCCC TTCTACCTGG CGATCCTGCT GCTGGTTCTG
GGTGGGGCGT TTACCAAATC GGCGCAATTT CCCTTCCATG TCTGGCTGCC CAACGCCATG
GAAGCGCCGA CACCCGTCTC GGCCTATCTG CACTCGGCCA CCATGGTCAA AGCCGGGGTC
TACCTGCTGA TGCGCTTGCA GCCGGTGCTG GGCTCCACAC CGGCCTGGGA AATATTGCTG
CCGTTTTTTG GCGGCGTCAC GCTGATCGTC GGTTCCGTCG TCGCCGTGCG CCAGACCGAT
CTGAAGCTGA TGCTGGCCTA TACCACAGTC GCCTCGCTCG GGTTGATGGT GATGCTGACC
GGCTTCGGCT CACCGCACGC GCTGTCGGCA GCCGTGCTTT ATCTGGTCGC CCATTCGCTA
TTTAAAGGCG CGCTGTTCAT GGTGGCCGGT GTTCTCGACC ACGAAGCGGG CAGCCGCGAC
CTGACCAGAC TTGGCGGGTT GGCGCGGGCC ATGCCTATTA CTTTTGCCAC AGCGCTGCTG
GCCGGGCTGT CCATGGCCGG ACTGCCGCCG CTGTTCGGCT TTCTCGCCAA GGAAGAAATC
TATGAGGCGC TGGCAGGGGG CAATCTTCGC GCCCTGCTGT TTACCGCCAT CGCCGTGATC
GGCAATGCGC TGATGATGGT CGTCGGGTTG GCGCTGGCCT TCAAACCGTT TCTGGGGCGC
GTGGCGACCA GCCAGAAACC CGCCCATGAC GGCCCCGCTT TGCTGTGGCT GGGGCCGTTG
GGGCTGGCCT TGACCGGACT GGGGGCTGCG GTGTTTTCCG GACTGTTTCA CCAGGCGATT
TCATCGCCAA TGGTTAGCGC TGTCACCGGC AGAACGGTGA CGGTCTCCAT CGGCCTTATC
CCGCATATCG GCGTGCCGCT TGCCCTGTCG CTTTTGACCA TCGCCATCGG CCTGGTGCTG
TTCATGCTGC TCGACAGGCT GCGCAATCTG GTGGCGAGCC TGTTGGAGAC GCTCGGTCCC
GGCCCCGATC AGGGCTTCGA CCACCTGATG GCCGGATTGG TGCGGCTCTG CTTCCGCATC
ACCAATGTGC TGCATGGCGG GCGGCTGGAT GTCTATGTCA CGGTGACGCT GATCGCCATT
GCCGCAGCTT TCCTGGTGCC GATGATGCTG TTTGGCGAGG CGCCGTCCTG GCCGGTGCTG
CCGGAGCGGA TCGAGTTGCA TGAAGCTGCT TTCCTGCTGA TCGCGGTGGC CGGTCTTTAC
GGCGTATTGC GGGCTGCCAA CCGGCTGGAT GCCATCGTCG CGCTCGGCAT CCAGGGCTTT
GCGATCTCGG TGATCTTCCT GCTGTTTGGC GCGCCGGACC TGTCCTTTAC TCAGTTCATG
ATCGAGACGC TTTCGGTGGT GATCCTGGCG CTGGTGATGA CGCGGCTGAA ACTGCATCCC
GCCGATCATC GGCCCCTACC CCAGATCCTG CTGGACGGCA CGGTGGCGCT TGCCGCCGGG
ACCGGCCTGA CGCTGATGCT GCTGAAGGTG ACGCAAATCC CCTTCGACCC GACCCTGACG
GAATTCTTCA ACAGCTATTC CAAGGTCATC GCCCATGGGG CCAATGTGGT GAACGTTATC
ATCGTCGACT TCCGCGGCGT CGATACCATG GGCGAAATTG CCGTGGTGAT GATCACCGGG
CTTGCCATTC TGGCGCTGAT CCGGCTGCGC GCGCCCAAGC CAACGGCTTC GCCGTCCGGG
GTGGGGCATG AAAGCCATGA GGTGGGAGAG CGCTCATGA
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| Protein sequence | MIADAAGMTL LALVLPFLGA CLAPWLVRRL GSRAAWVLAL LPLLSFVHFL GFLPEIANGE
EVTGGYAWVP SYNVSFSWFL DGLSLTFALL ITGIGTLIVL YAGGYMKGHP QQGRFLSFLL
LFMGAMLGVV MSDSFLMLFI YWELTSITSF LLIGFNHERP AARRAALQAL VITGGGGLLL
LAGLILLWNV SGVTQLSMLM HSNNMVTASP FYLAILLLVL GGAFTKSAQF PFHVWLPNAM
EAPTPVSAYL HSATMVKAGV YLLMRLQPVL GSTPAWEILL PFFGGVTLIV GSVVAVRQTD
LKLMLAYTTV ASLGLMVMLT GFGSPHALSA AVLYLVAHSL FKGALFMVAG VLDHEAGSRD
LTRLGGLARA MPITFATALL AGLSMAGLPP LFGFLAKEEI YEALAGGNLR ALLFTAIAVI
GNALMMVVGL ALAFKPFLGR VATSQKPAHD GPALLWLGPL GLALTGLGAA VFSGLFHQAI
SSPMVSAVTG RTVTVSIGLI PHIGVPLALS LLTIAIGLVL FMLLDRLRNL VASLLETLGP
GPDQGFDHLM AGLVRLCFRI TNVLHGGRLD VYVTVTLIAI AAAFLVPMML FGEAPSWPVL
PERIELHEAA FLLIAVAGLY GVLRAANRLD AIVALGIQGF AISVIFLLFG APDLSFTQFM
IETLSVVILA LVMTRLKLHP ADHRPLPQIL LDGTVALAAG TGLTLMLLKV TQIPFDPTLT
EFFNSYSKVI AHGANVVNVI IVDFRGVDTM GEIAVVMITG LAILALIRLR APKPTASPSG
VGHESHEVGE RS
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