| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1281 |
|---|
| Symbol | mnhE |
|---|
| ID | 7387652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1074439 |
|---|
| End bp | 1074912 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643650713 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit E |
|---|
| Protein accession | YP_002548919 |
|---|
| Protein GI | 222147962 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGT TGATCCTCAA CCTGCTGATG GCCATCATCT GGGTGGCGGT CACCGGCAGC
GCCAGCCTGC ATAATCTTCT GTTTGGCTTC GTGCTGTCGC TGGCGGTGGT CGGGTTGCTG
CGGGAGCAGA TCGGTGGCGT CTCCTATCTC AACAGAACGT GGCGCATCCT GTCCCTGCTG
CTGCTGTTTC TCAGCGAACT GGCCAAATCC GCCTGGAAGG TAACGATCAT GGTGCTTTCG
CCAGGGCTCG ATATCAAGCC CGGCATTTTT GCCTTTCCGC TCAGCGTCGA GCGCGATTTC
GAAATCACCC TGCTGGCCAA TCTCATCACG CTGACGCCCG GCACCCTGTC GGTGGATGTA
TCTGAGGACC GAAAGATCCT CTATGTCCAT GCGCTCGATT GCAGCGATCC GGATGCGGCC
CGGCGCGACA TTGCCGAGGG ATTCGAGCGC AAGATCCGCG AGGCGTTCCA ATGA
|
|---|
| Protein sequence | MRLLILNLLM AIIWVAVTGS ASLHNLLFGF VLSLAVVGLL REQIGGVSYL NRTWRILSLL
LLFLSELAKS AWKVTIMVLS PGLDIKPGIF AFPLSVERDF EITLLANLIT LTPGTLSVDV
SEDRKILYVH ALDCSDPDAA RRDIAEGFER KIREAFQ
|
|---|
| |