| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1274 |
|---|
| Symbol | |
|---|
| ID | 7387646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1070084 |
|---|
| End bp | 1070590 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643650707 |
|---|
| Product | Phosphinothricin acetyltransferase |
|---|
| Protein accession | YP_002548913 |
|---|
| Protein GI | 222147956 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.768034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC AGCACGTCAT CCGCGACGCA ACCGAAGCGG ACCTTGCCGC CATTGTCGAG
ATTTACAACC ACGCCGTCGA GCATACGACC GCCATCTGGA ACGAGGCGCT GATTGATGTC
GACAATCGCC GTGCCTGGCT GGAACTGCGC CGGGCCAGAG GCTTTCCGGT CCTTGTCGCT
GAGGTGGATG GTCGTGTTGC GGGCTATGCG TCCTATGGCG ATTGGCGGTC CTTCGATGGC
TATCGCCATA CGGTTGAGCA CTCTGTCTAT ATCGACAAGG ACCATCGTGG CGCAGGGCTT
GGCAAGGCGC TGATGCTGGC GTTGATCGAG CGCGCCAAGG CCGGAAATGT GCATGTGATG
ATCGCCGCCA TCGAGGCCGG AAACGCGGCC TCGATTGCCC TGCACGAAAA GCTCGGCTTC
CATCTGGTCG GCATACACCG CGAGGTCGGC ACCAAATTCG GCCGCTGGCT GGATCTGGCG
GCGATGGAAC TGATGATTGC GCGTTGA
|
|---|
| Protein sequence | MTTQHVIRDA TEADLAAIVE IYNHAVEHTT AIWNEALIDV DNRRAWLELR RARGFPVLVA
EVDGRVAGYA SYGDWRSFDG YRHTVEHSVY IDKDHRGAGL GKALMLALIE RAKAGNVHVM
IAAIEAGNAA SIALHEKLGF HLVGIHREVG TKFGRWLDLA AMELMIAR
|
|---|
| |