| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1253 |
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| Symbol | |
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| ID | 7387632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1054360 |
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| End bp | 1056537 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650693 |
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| Product | Polyphenol oxidase protein |
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| Protein accession | YP_002548899 |
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| Protein GI | 222147942 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0964309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGTG CTCGATGGCG TTGCCTTTTG GCCGCCGCCT TCATTAGCCC GATAGGCCCA
GCCCTGGCGC AGGATGCCCC GCAGGGTGCA AGCCCCCCTG CCGCAGAAGA AGCATTCGGC
AATCCGCCCG TGCTGGGGCA ATCGACTGTT GCGCCGAAGG GTACGCTTTA CCGGGTGCCA
CCATCCACGG TGCCGCTGCC CCATGCCGGG CGCGAACAGG TGCTCGACCT CAAGGTCGTC
TATACGGAAG GCACGATCCG CAAACCGGGT GGGCCGCCGG ATAACCCTTT CGATCGCGTG
CGCTTGCGCA GTTACCAAGG CACCAATGTC GATCGTGACC ATCCCTTTGT CGCTCCCACC
ATCGAGGCCA TGCCGGGCGA CACCATTCGG GTAAGGCTGG ACAACCAGCT GCCGGCCGAC
CCGTCCTGCA CATCCAGCGA TACATCGGTG GATACACCCC ATTGCTTCAA CGGCACCAAT
CTTCACAGCC ACGGCCTGTG GGTCAGCCCG ACCGGCAATA GCGACAATGT GCTGCTGTCG
ATCAATCCGG GCATGAAGTT TGAATATGAA TACAATATTC CAGCTGATCA TCCGGCGGGC
ACATTCTGGT ATCACCCGCA TCGCCATGGC TCCACCGCCT TGCAGGTCGG CAGCGGCATG
GCGGGCGCAC TGATCATTCG CGGCGACCGC CCACCAACAG ACAAGACCAA TGGCGACCTC
GACACCTTGG TCAAACCGTT TCCTGAACGG CTGCTGGTGT TCGAGCAGAT CCCCTATGCC
TGCCTGAAGG ATGGCAAGCT GAAACAGACA TTTGTCCCGG ATTCCAAAGA CCCGACGAAG
GGAAAATATG TCATCGACTG GAGCTGCAAG AAGGACGAAG TGGGCGAGGT GATTTCCTAC
GACCAGTTCA CGCCTTCGAG CTGGGATGAT TCCGGTCGCT TCACGACGGT TAATGGCCGG
GTGCGGCCCG TGTTCGCCAA TGCTGAAACT GGCAAGACCG AGCGCTGGCG GCTGGTGCAT
GCGGGCGTGC GCAACACGAT CCAGGTCCAG TTCCGCAAAA TGAACACCAC GGATTTCTTC
AAGCGGGAGC GCAGCACCGA TGCGGATGGG GAAGACCGGT TCGCCACTGA CCTGTGCACC
GGACAGCCGG TGCCGTATGT CGTTGCGGCT TCCGACGGGC TCACCATGCA GCAAGGTCAG
GTGCGCAAGG ATGTTACCCT GCAACCCGGC TATCGCAACG ACCTGCTGGT GAATTTCCCG
GAAGACGGTC TTTACTGCAT CGTCAACCCG CCAACCGACG CTGCCAATTC CGTCACGCGC
ACGCAGCAGG CCCGCTCGGT TCTCGGCTTC GTCCGGGTCA AAGGGGGCAA GGGCGCGCCC
GCAGCGGGTG ATCCGATTGC TGACATTAAA CGCCAGCTGA TCGCCAACGC CAAGGCCTTC
TACACGCCTG ATGTCGCCAA GACGGTGGTC GCTGATCTGA ACGATGAGCT GAAGCTGACG
AAATTCATTC CCCATCCGAC AGTTACCGAC GAAGAAGTTG CCAGCCAACC AAAGCAGGAT
CTGGTGTTCT TCATCAATCT CGGCGCGGGC GGCAACGGGC CTAACGGCTT CCAGGTCGGC
AATAATTTCA ATGTCGTGCA AAACGATGTC GGCGTCTATG TGCCAGACGG TGCCAAGGCT
TACGATCCGA ATGTGGTTGA TCGCAAGCTG GTGTTGGGGA CAGCGCAGGA ATGGGAGTTA
CGCTCCTATT TCGTCAGTCA TCCCTTTCAT ATCCATGTCA ATCCCTTCCA GATCGTCCGC
ATTCTCGATC CTGCTGGCAA CGATGTCAGC GGGCCGGTCA CAGACGGAAA GGAGAATTCG
GATTCGCAAT ATGCTGGACT GAAAGGTGTG TGGAAGGATA CGCTCTGGAT CAAAAGCAAT
GTCAACAACC CGCTGACAGC GGTTGATGCC GCCTGGCTGA ACGGCGATCT CAGCAGCAAG
TCGATCCCCG ATGCTCCCGA GGCCGCCAAG CCGCAAGGCG TCTACCGCAT CTTCATCCGC
ACCCGTTATG AACGCTATAT CGGCGAATTC GTCCTGCATT GCCACATCCT CGACCATGAA
GACCAGGGCA TGATGCAAAA TGTCTCCATC GGCTTGCCCG ACGGTGCCGG AGGATTGGCA
AACGCCCATC ATCATTGA
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| Protein sequence | MQSARWRCLL AAAFISPIGP ALAQDAPQGA SPPAAEEAFG NPPVLGQSTV APKGTLYRVP
PSTVPLPHAG REQVLDLKVV YTEGTIRKPG GPPDNPFDRV RLRSYQGTNV DRDHPFVAPT
IEAMPGDTIR VRLDNQLPAD PSCTSSDTSV DTPHCFNGTN LHSHGLWVSP TGNSDNVLLS
INPGMKFEYE YNIPADHPAG TFWYHPHRHG STALQVGSGM AGALIIRGDR PPTDKTNGDL
DTLVKPFPER LLVFEQIPYA CLKDGKLKQT FVPDSKDPTK GKYVIDWSCK KDEVGEVISY
DQFTPSSWDD SGRFTTVNGR VRPVFANAET GKTERWRLVH AGVRNTIQVQ FRKMNTTDFF
KRERSTDADG EDRFATDLCT GQPVPYVVAA SDGLTMQQGQ VRKDVTLQPG YRNDLLVNFP
EDGLYCIVNP PTDAANSVTR TQQARSVLGF VRVKGGKGAP AAGDPIADIK RQLIANAKAF
YTPDVAKTVV ADLNDELKLT KFIPHPTVTD EEVASQPKQD LVFFINLGAG GNGPNGFQVG
NNFNVVQNDV GVYVPDGAKA YDPNVVDRKL VLGTAQEWEL RSYFVSHPFH IHVNPFQIVR
ILDPAGNDVS GPVTDGKENS DSQYAGLKGV WKDTLWIKSN VNNPLTAVDA AWLNGDLSSK
SIPDAPEAAK PQGVYRIFIR TRYERYIGEF VLHCHILDHE DQGMMQNVSI GLPDGAGGLA
NAHHH
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