Gene Avi_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1244 
Symbol 
ID7387626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1049321 
End bp1049773 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content55% 
IMG OID643650687 
Productacetyltransferase protein 
Protein accessionYP_002548893 
Protein GI222147936 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGG AGGACTACAG TCGCTACCTC AATTATTTCA TTGCGGATTA CGCTGCCGAA 
ATCGCCCTCA ATTATAACCT CGCCGAGGGC GAGGCGTTAA AACGGGCAGA ACACGAGATC
GCTCAAAGCC TGCCGCACGG CCCGAAAACA CCGGGTCATG CATTGCTTAA CATTGTTGAC
AAGCAGCAGC AGGCGATCGG CTATCTCTGG TATCGCTTCG ATGAAACGAC GAAATCCGTG
TTCATCCTTG ATTTCTATGT CTTTCCGACC CATCGCGGCA AAGGCCAGGG CAAACAAGCC
CTTGCCGCCC TGGAAACCTT GCTGGCAGAG GAAGGATACC GCGAAATCAA GCTGCGGGTC
GCTGCCGACA ACGACCGCGC CCGGCATATC TATGAATATG GTGGCTTTCG TGTCACCGGC
GTCAACATGG CAAAGCAGAT CAGGGCTTCC TGA
 
Protein sequence
MSEEDYSRYL NYFIADYAAE IALNYNLAEG EALKRAEHEI AQSLPHGPKT PGHALLNIVD 
KQQQAIGYLW YRFDETTKSV FILDFYVFPT HRGKGQGKQA LAALETLLAE EGYREIKLRV
AADNDRARHI YEYGGFRVTG VNMAKQIRAS