| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1224 |
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| Symbol | |
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| ID | 7387614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1038470 |
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| End bp | 1039717 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650675 |
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| Product | MFS permease |
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| Protein accession | YP_002548881 |
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| Protein GI | 222147924 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCATA GTCGAATTTC CAGTCGGACC AACCCATTGA TTACTTTAAG GCCTCTCGCC
ATGCTTGATT CAAATAGGAA TCTCTTTTTT CTGGCAACAA TCTGCGCCTT TTGCGTCGCA
AATATCTACT ACAGTCAGCC TATGTTGGGG CTTATTGCCC AAGAATTTGG CGGAGAGGCA
GGCTCAGTAA GTGTCATAGC CACCATCGTC CAACTCTCTT ATGCGGCCGG TCTGGTGGTC
TTTGTGCCTC TGGGTGATCG GCTCTCGCGG CGCGGTCTGC TTGTGGGGCT TATTACGTTG
AACGCACTGG GGTCACTTTG CGCAGCATGT GCGACAAGCC TTTTTGCTTT AGGCGTGTCG
AACATCGTGA TTGGCATGAC CTCTGTTGGT GGGCAGATTA TTATTCCCGC CGTTTCTCTC
TATGCACGCG AAAACCGGCG TGGCCATGCG ATGGGCATTG TCACAAGCGG CTTGCTGGCT
GGTGTGCTGA TTGCCCGTGC GCTGTCGGGC ATCATTGGCG AATATGAAGG TTGGCGCGAA
ATGTATGTCG TCGCAACCGT GATCAATCTG GCGCTCGTGC CTTTCGCTAT GACGATCATT
CCGAAAAATG TCCCAGACGT CAAAGAGCCC TATGCTACAT TCATGAAATC CCTGTGGCAT
TTGGCCAAGC AACCGGAGTT GCACCTCCCC GCCCTCAGCG GCGCTTTGAT GTTTGGCTCC
TTCAGTGCGC TTTGGGGAAG CCTTGCCCTT CTGGCGGGCC AAGCCCCATA CCATTTAAAC
AGCGCCCAGA TCGGGGCATT CGGATTTGCT GGGTTGATAG GAACCCTTTC AGCCCCTTTT
ATCGGCAAAT TAGCGGATAA AATTGGCGCA CGCCGCGTTG TTTTATCCGG CGCGAGCCTC
AATATGCTGG CGTTCATGTT GATTGCTTTC ACCACGCATC AACTGTTCTT CCTGATCATC
GGAATGATTA TTCTTGATCT CGGCGGCAGA GCGGGTCTGG TCGGAAACCA AATCCGCGCA
CTTTCACTGG ACCCGCGCGC GCGCAGCCGC CTGAATACCG TTTTCATGTC AATTTATTTC
CTTGGCGGCG CTGTGGGGAC CAATTTGGGT GCCAGTGTTG GCGCGCACTA TGGCTGGTTC
GGCATTGCCG GTTTAGGCTT GTTCGCATCT TTCAGCGTGA TCGGACTGAA CTTCGTCAGT
CGCCCCAAGA GCGCGCTCAG CCCAGCCCAG AGGCAGGATC AGCAATGA
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| Protein sequence | MRHSRISSRT NPLITLRPLA MLDSNRNLFF LATICAFCVA NIYYSQPMLG LIAQEFGGEA
GSVSVIATIV QLSYAAGLVV FVPLGDRLSR RGLLVGLITL NALGSLCAAC ATSLFALGVS
NIVIGMTSVG GQIIIPAVSL YARENRRGHA MGIVTSGLLA GVLIARALSG IIGEYEGWRE
MYVVATVINL ALVPFAMTII PKNVPDVKEP YATFMKSLWH LAKQPELHLP ALSGALMFGS
FSALWGSLAL LAGQAPYHLN SAQIGAFGFA GLIGTLSAPF IGKLADKIGA RRVVLSGASL
NMLAFMLIAF TTHQLFFLII GMIILDLGGR AGLVGNQIRA LSLDPRARSR LNTVFMSIYF
LGGAVGTNLG ASVGAHYGWF GIAGLGLFAS FSVIGLNFVS RPKSALSPAQ RQDQQ
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