Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1222 |
Symbol | |
ID | 7387612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1036563 |
End bp | 1037381 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650673 |
Product | methyltransferase |
Protein accession | YP_002548879 |
Protein GI | 222147922 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.328239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA CGGCAATGCA ACAGAATTAC CACCTGAAAG ACGAGATCAA GGCCTATTGG TCGGCCCGCG CCGAAACCTT TGATAGCCAG CCGGGCCATG AGATCTTCTC AGACGAGGAG CGCGCCGCCT GGCATGCGCT GATCCGCAAA CATTTGGGGG TGGGCAACGT CGGCGCTGGC GAGGGTCGCA AGGTGCTGGA TCTGGCGTCA GGCACTGGCG TCGTCTCGCA TCTGCTTGAT GATCTCGGGT TTTCAGTGAC CGGCATGGAC TGGGCCGAAC CGATGCTGGA ACGCGCCCGC GCCAAGGCTA AATCCCGTGG CCGCAATATC CGCTTCCTGA TCGGCGACGC GGAAAACACC ATGGAGGCGG AGGCAAGCTA CGACGCCATC ACCAATCGTC ATCTGGTCTG GACGCTGATC GATCCGCTCA CGGCTTTCAA GGAATGGCAC CGCGTGCTGA AACCCGGCGG CAAGCTGCTG ATCGTCGATG GCGATTTCGT CAATCCCAGC CCGCTTGCCA AACTGACCGG CCTGCTGGCC AGGCTGGCGT CACGCCTTGG CATCGGCAAA GCCGTCGCCC ATCACGGCCC GGCATCGTCG CTGGTGGAAA CCCACCGGAG CATTCTCTCA CGGGTGTATT TTTCTGATGG CGCCAGGGCG GATGCCGTTG TGGCCCTGTT GAAGGAGGCT GGTTTTTCCT CCGTGACGGT TGATACAGAC TTGCGCGCCA TCAACCGGGC GCAACGCGCT AATTTCGGAT TTTTGAAGGG GCTAGAGCGG GCAACCCAGC ACAGGTATGC GATTTGCGCG GTGCGGTGA
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Protein sequence | MTQTAMQQNY HLKDEIKAYW SARAETFDSQ PGHEIFSDEE RAAWHALIRK HLGVGNVGAG EGRKVLDLAS GTGVVSHLLD DLGFSVTGMD WAEPMLERAR AKAKSRGRNI RFLIGDAENT MEAEASYDAI TNRHLVWTLI DPLTAFKEWH RVLKPGGKLL IVDGDFVNPS PLAKLTGLLA RLASRLGIGK AVAHHGPASS LVETHRSILS RVYFSDGARA DAVVALLKEA GFSSVTVDTD LRAINRAQRA NFGFLKGLER ATQHRYAICA VR
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