| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1214 |
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| Symbol | |
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| ID | 7387605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1029338 |
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| End bp | 1030540 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650666 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002548872 |
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| Protein GI | 222147915 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.416451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGA AATCCAGCAC CGAACAGATC CGCCGCCAGA ATTCGGCCCT GGTTCTCGCC
GCCTTGCGGG TGGAGCAGGC CATGTCCCAT ACCCAGATCG CCGCCGTGAC CGGTCTTGCC
TCGGCAACGG TGACCGCCAT TACCAGTGAG CTGGAACAGG CCGGTGTGAT CGAGCGGCAT
GAGCAGCAGA TTGCTGGCGC ACGGGGCAGA CCGCGTGTCG CCCTGTCGCG CCGCAGGGAT
TTCGCCTATG TGATGTCGGT CAGGATTTCC TCCGACCGGC TGAATTACAC CCTGTCGGAT
TTTCGCGGCA AGCTGATGGA CCGTTTCGAG GAACCGCGCC CGCTTGATGT GTCTGCGGCA
GGCTTTATTG AAGGGCTAGG CCGCAACCTT GCCCGTCTGG CCAGCCGGTC GAAACTGGAG
CCGGAAAAGG TCGCCGTTCT CTCTGTCAGT TCCAAAGGCA TTGTCGATGC GGGCGGCGCA
AGACTGTTGT GGACACCGGT ATTCGGCCAG CAACCGCTCG ACCTCAAGGC GGCCCTTGGT
GATTTCGAAA AGGCTATGGC TCTGCTCAGC AACGAGACCC TGCTGGTGGC TCACGGTCTC
AGCCGCCGCA TGGATGCCCA GGATGGCACG TTTCGCGGCC TGATCGCGCT GTCGCTTGGC
CACAGCATTG GTCTCGGTAT TGCAAGGCCG ATGCCGGATG GCACGGTGGC GGTCAGCGCC
CCGAATTTCG GCCATATGCT CAATACCGCC GACAGCAAGT TGTGCCGCTG CGGCGCACGC
GGCTGTATCG AGGCCTCCGC CGGCTTCTAC GGCATTCTGC GCATGGCGTT TGAAGTGCGG
CCCGATACCA TTCCCGCCAA GTTTGTGCCG ATTACCGAGA TGGACAAAAT CGCGCTCTCG
GCGCGCCAGG GCAATCGCAT GGCCCAATAT GCCTTCCGCC AGGCAGGGCT GGCACTCGGC
CAGGGCCTGT CACGGGTGTT CAGCCTCCAC GAAACGCTCC CCGTCACCAT CACCGGCCCT
GGCACCCGCT ACTATGACCT GCTGGCGCAG GGGCTAGAGG AGGGCCTTGC CCAATCCCTG
CAAGTCCGCC TCGACGGCGC CCCACCGATC AGCCTTGTTG GCGACGAGGC CGATCTGGTG
CAGGAGGGGC ATGTGGATCA TGCGCTGCGG GCGATTGATG AGCGGTTGTT TGGGGGTGGG
TGA
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| Protein sequence | MLMKSSTEQI RRQNSALVLA ALRVEQAMSH TQIAAVTGLA SATVTAITSE LEQAGVIERH
EQQIAGARGR PRVALSRRRD FAYVMSVRIS SDRLNYTLSD FRGKLMDRFE EPRPLDVSAA
GFIEGLGRNL ARLASRSKLE PEKVAVLSVS SKGIVDAGGA RLLWTPVFGQ QPLDLKAALG
DFEKAMALLS NETLLVAHGL SRRMDAQDGT FRGLIALSLG HSIGLGIARP MPDGTVAVSA
PNFGHMLNTA DSKLCRCGAR GCIEASAGFY GILRMAFEVR PDTIPAKFVP ITEMDKIALS
ARQGNRMAQY AFRQAGLALG QGLSRVFSLH ETLPVTITGP GTRYYDLLAQ GLEEGLAQSL
QVRLDGAPPI SLVGDEADLV QEGHVDHALR AIDERLFGGG
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