| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1210 |
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| Symbol | |
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| ID | 7387602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1025330 |
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| End bp | 1026115 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650663 |
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| Product | ABC transporter |
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| Protein accession | YP_002548869 |
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| Protein GI | 222147912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.986169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAC AGAACACGCC TCTTGTGGAA ATGAAGAATA TTTCCATCTC CTTCGGCGGT
ATTCATGCCG TCGATGATGC CTCGGTGGAT CTTCATGCCG GTGAGGTGGT CGCCCTGCTC
GGCCATAACG GTGCGGGCAA ATCGACGCTG ATCAAGATCC TGTCGGGCGC CTACAAGCGC
GATGGTGGCG AAATCCTGAT CAATGGCGAA CCGGCCGAGA TCAACAATCC GCGCGATGCC
AAGCGCTACG GCATCGAGAC GATCTACCAG ACGCTGGCCG TCGCCGACAA TGTCGATGCC
GCCGCCAATC TCTATCTCGG CCGCGAGCTG CGCACCCCCT GGGGCACGCT GGATGATGTG
GCGATGGAGG CGAAGGCCCG CGAGGTGATG GGCCGGCTCA ACCCGAATTT CCAGCGCTTC
AAGGAGCCGG TGAAAGCCTT GTCAGGCGGC CAGAGGCAAT CGGTGGCCAT TGCCCGCGCC
ATCCTGTTTG ATGCCCGCAT CCTGATCATG GATGAGCCGA CCGCAGCGCT CGGTCCTCAG
GAAACCGCCC AGGTGGGCGA GCTGATCCTG CAACTGAAAA AGGAAGGCAT CGGCATTTTC
CTGATCAGCC ACGACATTCA CGATGTCTTC GATCTCGCCG ACCGGGTGTT TGTGATGAAA
AACGGCAAGG TGGTCGGCCA TGCCCGCACA GGGGATGTTA CCAAGGACGA GGTGCTGGGC
ATGATCATCA TGGGCAAAGT GCCGCCGGGT GCCGTGCCTG GCCCCGGCGC GATGCAGGTG
GTTTGA
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| Protein sequence | MTQQNTPLVE MKNISISFGG IHAVDDASVD LHAGEVVALL GHNGAGKSTL IKILSGAYKR
DGGEILINGE PAEINNPRDA KRYGIETIYQ TLAVADNVDA AANLYLGREL RTPWGTLDDV
AMEAKAREVM GRLNPNFQRF KEPVKALSGG QRQSVAIARA ILFDARILIM DEPTAALGPQ
ETAQVGELIL QLKKEGIGIF LISHDIHDVF DLADRVFVMK NGKVVGHART GDVTKDEVLG
MIIMGKVPPG AVPGPGAMQV V
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