| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1207 |
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| Symbol | |
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| ID | 7387599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1021318 |
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| End bp | 1022250 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650660 |
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| Product | permease |
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| Protein accession | YP_002548866 |
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| Protein GI | 222147909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAGT TTATTCGCGT GCTGACAATA CTCACGGCCT TGATCCCCAT CTTCACCTTG
ATTTTGATGG GGTTCATTCT CCATCGCCGC ACTCTTCTGG CGTCCGAATT CTGGATGCCG
TGCGAGCGAT TGAACTACTT CTATCTCTTT CCAGCCTTGA TGTTCAGCCA GATCGTGACG
GCTGACCTTG CCGGTATTTC TTTGCGCCTT GTCACCATCG CTCTGCTGGG CGGCATTGTG
CTGGGCGGCA GCATCGTCTT TCTGCTGCAA GCGCTGTTTC CGAGACCGGG GCCTGTTTTT
TCCTCGGTTC TGCAAGGGGC TCTACGCCCC AACACCTATG TTGCCGTTGC CGCCGCGACC
GCCCTTTATG GTCAGCCAGG ATTAATGGTG ACGGCTGTGG CCATCGCCAT CACCATTCCG
GTGCTGAATG TCGGATCGAT CTTCATTCTG ATGATCCATG GGGATAACGG CCCTGTCGGT
AAAAGGCATA TGGTGAAAAC CATTGTTACC AATCCCGTCA TTTTATCCGT GGTGCTTGGT
GGCGTGGTCA ATCTTGCCGG CATACCAATG CCGGATTTCG TGACAGCCAT TCTCAAAATT
TTGGGAAGCG CTTCCCTGCC ACTTGGACTG TTAAGCGTCG GGGCCGGAAT AGATTTTGCC
GCTGTTCGCG CCTCGCGTGG CATGATTTGG TTGTCTTCGG CCATCAAGCT CGCTGTGCTG
CCGGTTGCCA CCTATGGGAT CGGCACGTCG CTTGGCTTGA CTGGCACATC TCTGGCAACG
ATCATCTTGT TCAATTCACT TCCGTGTACA CCTTCCACCT ATATCATGGC CCGGCTGTTC
GGAGGAGATT ATCGGATCGC GGCCAGCATT ATCAGCATCC AGACGGCAAT AGCGGCTGTG
ACGATACCTT TGGTGCTGGC CGCTTTGGTT TAG
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| Protein sequence | MPEFIRVLTI LTALIPIFTL ILMGFILHRR TLLASEFWMP CERLNYFYLF PALMFSQIVT
ADLAGISLRL VTIALLGGIV LGGSIVFLLQ ALFPRPGPVF SSVLQGALRP NTYVAVAAAT
ALYGQPGLMV TAVAIAITIP VLNVGSIFIL MIHGDNGPVG KRHMVKTIVT NPVILSVVLG
GVVNLAGIPM PDFVTAILKI LGSASLPLGL LSVGAGIDFA AVRASRGMIW LSSAIKLAVL
PVATYGIGTS LGLTGTSLAT IILFNSLPCT PSTYIMARLF GGDYRIAASI ISIQTAIAAV
TIPLVLAALV
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