Gene Avi_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1195 
Symbol 
ID7386245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1009190 
End bp1009582 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content56% 
IMG OID643650651 
ProductTwo component sensor kinase/response regulator hybrid protein 
Protein accessionYP_002548857 
Protein GI222147900 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACG GCAGACCGGT TATCCTGGTC GTGGAAGATA GCCCGTTGAT CCGAATGGGT 
GCCATCGATC TTGTCATATC GGCGGGCTAC GAAGCGCTGG AGGCTGGCGA CGCTGACGAG
GCAATCCGCA TCCTCGAATC GCGAGACGAC ATTGACCTTG TGTTCACCGA TGTTCAGATG
CCGGGGACGA TGGACGGTAT CAAATTGTCC CACTACATCC GTGATCGATG GCCGCCGGTA
AAGCTGATCG TCGCATCCGG TGCTGCCATT CTCGAGGAGA GCATGCTGCC TGGTGGAAGT
CGCTTCTTCT CGAAGCCCTA CGACGAACTC ACCATTACCG AGGCAATGGC ACAGCTGCTT
TTGAGCGAGG ATCCACACGC CACTATCACC TGA
 
Protein sequence
MKNGRPVILV VEDSPLIRMG AIDLVISAGY EALEAGDADE AIRILESRDD IDLVFTDVQM 
PGTMDGIKLS HYIRDRWPPV KLIVASGAAI LEESMLPGGS RFFSKPYDEL TITEAMAQLL
LSEDPHATIT