Gene Avi_1190 details

Gene Information

• Locus tag: Avi_1190
• ID: 7386242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1005742
• End bp: 1006164
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643650648
• Product: organic hydroperoxide resistance protein
• Protein accession: YP_002548854
• Protein GI: 222147897
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1764] Predicted redox protein, regulator of disulfide bond formation
• TIGRFAM ID: [TIGR03561] peroxiredoxin, Ohr subfamily

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.481185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATTC TCTACACAAC CAAGGCATCT GCAACCGGTG GTCGTGAAGG CCGCGCCGTC 
AGCGAAAATG GCGTTCTGGA TGTAACGCTG ACGACGCCGA AGGAATTGGG CGGCAATGGC 
GCCACCGGCA CCAATCCCGA GCAGCTGTTT GCCGCTGGCT ATTCCGCCTG CTTCCTCGGC 
GCGCTGAAGT TTGCCGCTGG CCAGCAGAAG GTGAAGGTAC CAGAAGACGC CAAGGTCACC 
GCCACGGTTG GTATCGGCCC GCGCGAAGAC GGCACCGGCT TTGGCATCGA AGTTTCCATC 
AGCGTTGACC TGCCAGGCAT CGACCGCGAA ACCGGCGAAA AACTCGTCGC CGCCGCCCAC 
ATCGTCTGCC CCTACAGCCA CGCCATGCGC ACGGCAACAG AAGTATCCGC TACGCTGGCC 
TAA 

 

Protein sequence

MAILYTTKAS ATGGREGRAV SENGVLDVTL TTPKELGGNG ATGTNPEQLF AAGYSACFLG 
ALKFAAGQQK VKVPEDAKVT ATVGIGPRED GTGFGIEVSI SVDLPGIDRE TGEKLVAAAH 
IVCPYSHAMR TATEVSATLA