| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1187 |
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| Symbol | |
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| ID | 7386240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1004264 |
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| End bp | 1005019 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650646 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548852 |
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| Protein GI | 222147895 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.606304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGTTTGT GCGCTGCTGA CCAGCAGGAT GTACCACCGT ATATGACAAG CCCCGATTTT
TCCCGCCGTG CCTTTCTCTC TTTTTCCGGC CTTGGAGCGG CAGCGCTTCT GTCCAGTTGC
GCCTCGTCCT ATCGCCCTCC GGTGTATGAA CAGGGGTCGC TGGGCGGCAT GGTGCAGCCC
ACGGGCCCCA TGGCCCCATC CACGCCGGAA CTGGACGCCA TGTATGGCGA AGTGGTCGAT
GGCGGCTTCG TCATTCCGGC CATTCCCTAC CAGCAGATCC CGCCGCGCTA CTATCGCCAG
CGGGTCAGCG ACCCGACCGG CTATCCGGCA GGCTCCATCG TTGTCGATAC GCCCAACCGC
TTCCTCTATC TGGTGGAACA GGGCGGCACC GCCATGCGCT ACGGCGTTGG CATCGGCCGT
GAGGGCTTTG CCTGGCAGGG CGAAGGCGTG ATCCAATGGC GGCAGAAATG GCCAAAATGG
ACGCCGCCGG ATGAAATGGT CGCCCGCCAA CCGCAACTGG CCAAATATTC CTCCGCCAAT
GGCGGCATGG CGCCGGGCCT GATGAACCCG CTGGGCGCGC GCGCGCTCTA CATCTTCCAG
AACGGCCAGG ACACGCTTTA CCGCCTGCAT GGTTCGCCGG AGTGGAACTC GATCGGCAAG
GCGATGTCGT CGGGCTGTGT GCGGTTGATG AACCAGGACA TTATCGACCT CTATGACCGT
GTGCCGAACA AGGCGCGGAT CATCGTCCTG CAATAG
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| Protein sequence | MRLCAADQQD VPPYMTSPDF SRRAFLSFSG LGAAALLSSC ASSYRPPVYE QGSLGGMVQP
TGPMAPSTPE LDAMYGEVVD GGFVIPAIPY QQIPPRYYRQ RVSDPTGYPA GSIVVDTPNR
FLYLVEQGGT AMRYGVGIGR EGFAWQGEGV IQWRQKWPKW TPPDEMVARQ PQLAKYSSAN
GGMAPGLMNP LGARALYIFQ NGQDTLYRLH GSPEWNSIGK AMSSGCVRLM NQDIIDLYDR
VPNKARIIVL Q
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