Gene Avi_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1179 
Symbol 
ID7386235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp999404 
End bp1000036 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content58% 
IMG OID643650641 
Productnitroreductase 
Protein accessionYP_002548847 
Protein GI222147890 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCTTG ATAAATTGAA CTGGCGTTAT GCCGCCAAGA AAATGGACCC GTCGAAGACT 
GTTGCTGAAG ACAAGGTCGA GCGTATTGTC GAGGCGGCCC GGCTGGCACC GACCTCCAGC 
GGCTTGCAGC CGTTTTCCGT GCTTGTCGTA ACCAACAAGG AGATCCGCGA GCGGATCAAG 
CCGATCGCCT GGAACCAGGG CCAGATTACC GATTGCTCGC ATCTGCTGGT GTTTGCCGCC 
TGGGACAATT ACACCGCAGA GCGGATCAAC ACGATGTTTG ATCTCACCAA TGCCGAGCGC 
AATTTTACCA ATGAAGGCTG GGAAAACTAT CGCAAGATGC TGCTGGATAC CTATCCACCA 
CGCGACGCCG AAGTGAATTT CGAACATGCC GCCCGCCAGG CCTATATCGC ATTGGGGCTG 
GCACTGACGG CTGCTGCCTT CGAAGAGGTC GATTCAACCC CGATGGAAGG CTTTGACCCG 
GCAGCGCTGG ACGAAATCCT CGACCTACGC GCCAAGGGCC TGCGCTCCGT CGCCATCCTG 
CCGCTGGGCT ATCGTCAGCC GGATGGCGAC TGGCTGGTCA ACCTGAAAAA AGTCCGCCGC 
GCCCGTGAAG ATTTTGTCAT CGAGGTGAAG TGA
 
Protein sequence
MLLDKLNWRY AAKKMDPSKT VAEDKVERIV EAARLAPTSS GLQPFSVLVV TNKEIRERIK 
PIAWNQGQIT DCSHLLVFAA WDNYTAERIN TMFDLTNAER NFTNEGWENY RKMLLDTYPP 
RDAEVNFEHA ARQAYIALGL ALTAAAFEEV DSTPMEGFDP AALDEILDLR AKGLRSVAIL 
PLGYRQPDGD WLVNLKKVRR AREDFVIEVK