Gene Avi_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1168 
Symbol 
ID7386228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp991751 
End bp992251 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID643650634 
Producthypothetical protein 
Protein accessionYP_002548840 
Protein GI222147883 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.193996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCCA CTCCTCCCTT GATCCTGGCA CCGCTGGCGC GCGACGACCG CGCCCGCGTG 
CTGCATCTGG CTTTGCCACC GGAGCAGCAG ATGTTTGCCG GGCCTATCGA AAACGTTATC 
GACGACGGCG ATCAAACGGT GGATTTTCAC ATCGGCAGTG TCAGCGATGA CCCTGTCTGC 
TTCTTCAAGA TCGACAGGGA CTATAATACC CGGCTTACCG GTTTTGACTT GGCGGAGCAA 
GGTTTCCAGC CCGGCGATCT CGGCCTGCGG GCACTGATCG TCGGCAGCCA ATTTCAGGGA 
AAAGGCTATG GCACGGCAGC CATGGCCGCC CTGCCCACCT ATCTCGCCCG CCATTATCCG 
GCCAGACACT GTTTCCTCAC CGTCAACCTG CGCAATCCGG CGGCGATCAG CCTTTACACA 
AAAGGCGGCT GGCAGGATAC CGGCCAAACC TATCTGGGCG GCAAGGCCGG ACCGCAGATC 
CTGATGCGGC TGGAGCTCTG A
 
Protein sequence
MHPTPPLILA PLARDDRARV LHLALPPEQQ MFAGPIENVI DDGDQTVDFH IGSVSDDPVC 
FFKIDRDYNT RLTGFDLAEQ GFQPGDLGLR ALIVGSQFQG KGYGTAAMAA LPTYLARHYP 
ARHCFLTVNL RNPAAISLYT KGGWQDTGQT YLGGKAGPQI LMRLEL