Gene Avi_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1151 
Symbol 
ID7386214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp971713 
End bp972261 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID643650620 
Producttranscriptional regulator TetR family 
Protein accessionYP_002548826 
Protein GI222147869 
COG category 
COG ID 
TIGRFAM ID[TIGR03384] transcriptional repressor BetI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.741088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCCA TCGGCACGCA TGGCTCGCTG GCTGTCACCA TGTCTGAAAT TGCCCGTACC 
GCCGGGGTTT CTCCCGCTTT GGCCCATCAT TATTTCGGCT CCAAACAGCA ATTGCTGATC
GAAACGATCC GCTCGCTGTT GAGACAATTG CAAGCCGATG CCGCCAGCGC GCTGACCGCG
GCAACCACCC CGCGCCAACG GATTAGCGCC GTGATCCGTA TCAGCTTCCA GGCCGACCAG
TTTGCGCCCG ATACCGTGGC GGCCTGGCTT GCCTTCTATT CCGAAGCGCA ACGCTCGGAA
GCGACCCGCC GCCTGCTGGT GATCTATGCC CGGCGGTTGC GCTCCAATCT GGTCAACGCC
CTATTGCCTC TGGCCAGCCG GTCCGACGCC GAGCGTATTG CCGAAGGCAC GGCAGCAATG
ATCGACGGGC TTTACATTCG CCAAAGCCTG CGGGCAGCGC CGCTGTCCAT TGATGCCTCT
GTCACACTGG TGGAGGACTA TGTCAGCGGC CAGTTACATG CCATCAACCT TGGAGAGCCC
AGACCGTGA
 
Protein sequence
MKAIGTHGSL AVTMSEIART AGVSPALAHH YFGSKQQLLI ETIRSLLRQL QADAASALTA 
ATTPRQRISA VIRISFQADQ FAPDTVAAWL AFYSEAQRSE ATRRLLVIYA RRLRSNLVNA
LLPLASRSDA ERIAEGTAAM IDGLYIRQSL RAAPLSIDAS VTLVEDYVSG QLHAINLGEP
RP