| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1147 |
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| Symbol | betB |
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| ID | 7386211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 968092 |
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| End bp | 969558 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650617 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_002548823 |
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| Protein GI | 222147866 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAG CCCAACCCAA AGCCTCCCAC TTCATTGATG GCGAATACGT TGAAGACGCA
AGCGGCACCG TGATTGACAG CATCTACCCC GCAACGGGCG AGGTGATTGC CCGGCTGCAC
GCCGCAACGC CTGCGATTGT GGAGCGGGCC ATTGCAGCGG CCAAGCGGGC GCAGAAGGAA
TGGGCAGCTC TTAGCCCCAC TGCCCGTGGC CGGGTGCTGA AAAAGGCCGC CGAGATCATG
CGGGAGCGCA ACCGCGAACT GTCGGAACTG GAAACGATGG ACACGGGCAA ACCGATTCAA
GAAACCATTG TGGCGGACCC AACATCGGGC GCGGATAGTT TTGAGTTTTT TGGCGGAATT
GCCGCCGCTG GACTCAACGG CAGCCACATT CCGCTGGGCA ATGATTTTGC CTATACCAAA
CGGGTTCCCC TTGGCGTCTG TGTTGGCATT GGCGCGTGGA ACTATCCGCA GCAGATCGCC
TGCTGGAAAT CGGCCCCGGC GCTTGCCGCT GGCAATGCCA TGGTGTTCAA GCCATCAGAA
ATGACGCCGC TGGGGGCTTT GAAGATTGCC GAGATTTTGA TCGAGGCAGG TGCGCCCAAG
GGCGTGTTCA ACGTCATTCA GGGCGATCGG GAGACAGGGC CATTGCTGGT CAATCATCCC
GATGTGGCCA AGGTGTCTTT GACTGGCTCA GTGCCAACGG GGCGGAAAGT TGCGGCGGCG
GCGGCAGGGC ATTTGAAGCA CGTCACCATG GAACTTGGCG GCAAATCGCC TCTGATCGTG
TTTGATGATG CGGATGTGGA CAGCGCCATT TCCGGGGCGA TGCTGGCGAA TTTTTACTCC
ACGGGACAGG TTTGCTCCAA CGGCACGCGG GTGTTTGTTC ACACAGCCAT CAAGCAGGTC
TTCCTTGAGC GCTTGAAGGC CCGCACGGAA GCGATTGTGA TTGGTGATCC GCAAGATGAG
GCCACCCAGA TGGGGCCTTT GGTGTCGATG GCGCAGCGGG AAAAAGTGCT GTCCTATATC
GACAAGGGCA AGGCCGAGGG CGCGACACTG ATCACGGGCG GCGGCATTCC CAACAGCGCG
TCGGGCACTG GTGCGTTTAT TCAGCCCACG GTGTTTGCCG ATGTGACTGA TAGCATGACC
ATCGCCCGCG AAGAGATTTT TGGCCCCGTG ATGTGCGTGC TGGATTTTGA CGACGAGGCT
GACGTGATTG CCCGCGCCAA TGCATCCGAA TTTGGCCTCG CGGGCGGCGT GTTTACCGCC
GACATCACCC GCGCCCACCG CGTGGTGGAT CAGTTGGAAG CCGGAACGCT GTGGATCAAC
ACTTATAATC TCTGCCCGGT GGAAATGCCG TTTGGTGGCT CCAAACAATC CGGTTTTGGC
CGCGAGAATT CGCTGGCGGC GCTGGAGCAT TATTCGGAGT TGAAGACGGT TTATGTGGGC
ATGGGCAAGT GTGAAGCGCC GTATTGA
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| Protein sequence | MMKAQPKASH FIDGEYVEDA SGTVIDSIYP ATGEVIARLH AATPAIVERA IAAAKRAQKE
WAALSPTARG RVLKKAAEIM RERNRELSEL ETMDTGKPIQ ETIVADPTSG ADSFEFFGGI
AAAGLNGSHI PLGNDFAYTK RVPLGVCVGI GAWNYPQQIA CWKSAPALAA GNAMVFKPSE
MTPLGALKIA EILIEAGAPK GVFNVIQGDR ETGPLLVNHP DVAKVSLTGS VPTGRKVAAA
AAGHLKHVTM ELGGKSPLIV FDDADVDSAI SGAMLANFYS TGQVCSNGTR VFVHTAIKQV
FLERLKARTE AIVIGDPQDE ATQMGPLVSM AQREKVLSYI DKGKAEGATL ITGGGIPNSA
SGTGAFIQPT VFADVTDSMT IAREEIFGPV MCVLDFDDEA DVIARANASE FGLAGGVFTA
DITRAHRVVD QLEAGTLWIN TYNLCPVEMP FGGSKQSGFG RENSLAALEH YSELKTVYVG
MGKCEAPY
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