| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1139 |
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| Symbol | |
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| ID | 7386205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 962434 |
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| End bp | 963756 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643650611 |
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| Product | chloride channel protein |
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| Protein accession | YP_002548817 |
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| Protein GI | 222147860 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGGC GCTCGCGCGC GCTCAGCGGT TCCTGGCGGA TGTGGAAAAT GCGGCTGGTC
TTCTGGGCCG GTGCTGGTGC CATCGGCGTC GTTAGCGTCG GCTTTGCCTG GCTGGCAGAC
CGCGCCCAAG GGCTGTTTCA CACGATCACC CACGCCACGC AATGGACCTT TCTCCTTCCG
CTTCTGTTGA CGCCGGCAGG CTTTGCGCTT TGCGCGCTTC TGGCGGCCAA GGTTTTTCCC
GCATCACAAG GCTCCGGCAT TCCCCAGGCG ATTGCCGCCC GTCATATCGA TGATCCGGCT
GGGCGCAGCC GGTTGCTGTC AATGCGGATC GCTATCGGCA AGGTGCTTTT GACCGCAATC
GGTCTGCTCT GCGGCGGATC GATCGGGCGC GAGGGACCGA CCGTGCAGGT CGGGGCTTCG
ATCATGCTGT TTTGCGCCCG CATTGGCGGG ATGGCGCGGG CAGATGGGCT GATCCTGGCC
GGATCGGCGG CGGGCATTGC CGCTGCGTTC AATACGCCGC TGGCCGGGAT CGTCTTTGCC
ATCGAGGAAA TGAGCAAGAC CTATCACTCC CGCGTCAACA GCCTGGTTCT GATCGCGGTG
ATCGTTTCCG GCCTTGCAGC CCTCGGTCTC GTTGGCAGCT ATACCTATTT CGGCACCGCC
AATCCCACCG TCTCCGGCTT GCGCGATTGG ATGCTGGTCG GCCTGTGCGG CATTGGCGGC
GGCGCCTTCG GCGCGCTGTT CAGTGCGGGG GCGCTGACCT TGATGCGCCG GATACGCCGC
TGGACCCAGC TATCGGCCAT GCCATTGCGG CGCGCCGTGC TGCTCGCCGC CGTTTGCGGA
CTGGGCGTGG CGCTGATCGG CATCCTGACT GGAGGCGCCA CCTACGGCAC CGGCTATGAA
CAGGCGCGCG GCGCGGTGGA GGGCCAGGCC CTGCCGCTGC TGTTTTTTGC GCAAAAGCTG
GCGGCCTCGT TCCTGACGAT GATTTCCGGC ATTCCGGGTG GAATTTTCGC GCCTTCCCTG
TCAGTGGGGG CGGGGCTCGG CAGCACCGCC GCCAGCCTGA CCGGCTCCAG CATTGCGCTT
GGCGCCATTC TCGGCATGGC CGGCTATTTC GCTGGTGTGG TGCAGGCGCC AATGACCGCC
TTCGTGATCA TCATGGAAAT GACCGCCAGC CATGATAGCG CCATCGCCAT CATGACCGCA
GCCATGCTGG GCTATGCGAC GTCGCGGCTT CTGTCACGCG AACCGCTCTA TCACGGCCTG
TCGCGCCCAT TCCTCGCCGA AGCGATCCGC GCCAGCCGGG CGGCGGAGCG CAGCCAAAGC
TGA
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| Protein sequence | MLRRSRALSG SWRMWKMRLV FWAGAGAIGV VSVGFAWLAD RAQGLFHTIT HATQWTFLLP
LLLTPAGFAL CALLAAKVFP ASQGSGIPQA IAARHIDDPA GRSRLLSMRI AIGKVLLTAI
GLLCGGSIGR EGPTVQVGAS IMLFCARIGG MARADGLILA GSAAGIAAAF NTPLAGIVFA
IEEMSKTYHS RVNSLVLIAV IVSGLAALGL VGSYTYFGTA NPTVSGLRDW MLVGLCGIGG
GAFGALFSAG ALTLMRRIRR WTQLSAMPLR RAVLLAAVCG LGVALIGILT GGATYGTGYE
QARGAVEGQA LPLLFFAQKL AASFLTMISG IPGGIFAPSL SVGAGLGSTA ASLTGSSIAL
GAILGMAGYF AGVVQAPMTA FVIIMEMTAS HDSAIAIMTA AMLGYATSRL LSREPLYHGL
SRPFLAEAIR ASRAAERSQS
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