| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1125 |
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| Symbol | cytR |
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| ID | 7386196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 952540 |
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| End bp | 953571 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650601 |
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| Product | transcriptional repressor LacI family |
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| Protein accession | YP_002548808 |
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| Protein GI | 222147851 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00370144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGAAAA AAATCAGGGC GTCGGGCAAT CGCCTGACAT TGAACGAAGT TGCGGAGAAA
GTCGGCGTTA GCCCGATTAC CATTTCAAGG GCGCTGAACA AGCCGGAAAA AGTCTCTCCA
GGACTGCGCG AAACGATTCT GAAAATCGTC GAGGAACTCG GCTATGTGCC CGACTACGCC
GCAAGGGCCT TGGCGAGCAG AAACAGCAAT ACGATCGGCG TCCTGTCCTC GTTGCTGGGT
ACCAATATTT TCCCCAGGGT CATGAAAGGC ATCGAGGATC GGGCCCGGGG CACGGGCCTG
CGCATCCAAT ATGTCAATAC GCGCTACGAT CCCGATGAAG AGCTTTACCA GCTCAGACAG
TTTTTCGCGC AGAAGCCGAC AGGCATCATC ATTGGTGGCG TGCAGGTCGA TCCGCGGGTG
ACGGAAATGC TGCATGATGC GCCCTGCCCT GTCGTACAGT TTATCGATAT CAGCTATCCG
CCGGTCGATA TGGCCATCGG CATCAACAAT GCCGCCGCCG CCGATGTCGC CATCCGGCAT
CTGCTGGATG TGGGCTATCA CCGGATCGCA TTCTGCTCGA CCGGTACCGA TATTCCGGTG
CGGATGCGGC TGGAGAGCTA TCGCAACAGA CTGAGGGAAG CAGGGCTTTA CAATCCTGAT
CTCGAAGTCA ATGTGGACGC GAACGATTGC TTCGGATCAG CGGGCAAGAC CCTCGACACA
TTGTTTGCCG CCGATCCCGA GGTCGATGCC GTCCTATGTT GTCACGACGA CCTGGCGCTT
GGCCTGCTGT TCGAATGCCA GCGGCGCGGC ATCAGTATTC CCGACCGACT CGGACTGTGC
AGTTTCACCG ACCTCGATTA TTGCGCCCAC ACCGTGCCTG GCCTGACGAC GGTGCGCACC
CCGCTCTATC AGCTCGGCTA CCGCGCCACC GACATGATCA TCCGCAGCCA GGACAAGAGC
CGCCAGAAAC ACACGACGGA TCTCGGTTTC GAGCTGATCG CCCGAGGCTC CACCCGCCGT
CCCAAACCAT GA
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| Protein sequence | MGKKIRASGN RLTLNEVAEK VGVSPITISR ALNKPEKVSP GLRETILKIV EELGYVPDYA
ARALASRNSN TIGVLSSLLG TNIFPRVMKG IEDRARGTGL RIQYVNTRYD PDEELYQLRQ
FFAQKPTGII IGGVQVDPRV TEMLHDAPCP VVQFIDISYP PVDMAIGINN AAAADVAIRH
LLDVGYHRIA FCSTGTDIPV RMRLESYRNR LREAGLYNPD LEVNVDANDC FGSAGKTLDT
LFAADPEVDA VLCCHDDLAL GLLFECQRRG ISIPDRLGLC SFTDLDYCAH TVPGLTTVRT
PLYQLGYRAT DMIIRSQDKS RQKHTTDLGF ELIARGSTRR PKP
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