| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1106 |
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| Symbol | |
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| ID | 7386184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 936897 |
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| End bp | 937817 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650588 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548796 |
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| Protein GI | 222147839 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCC TGCCACAATT GGGGGCTTTG AAGGCCTTTT CGGTGGCAGC ACGGTATGAA
AGTTTTGTGT TGGCGGCCCA GGAATTGCAC GTCACACACG GGGCGATCAG CAAGCAGGTC
AAAAATCTGG AGGAAAGTCT GGGCGAGCCG CTGTTCCTGC GTCGCAACCG GGCGGTCTTC
CTGACGGAGC GCGGTCGTCA ACTGGCGGCC AGGCTTGCCT CCGTGTTCCA GGATCTGGAA
AATGTCGTAA CGGATTTTCG CAGCAATGCC TATGCGCAAC CCCTGATCGT CTCCTGCGAA
CCGACGCTCT GCCTGAAATT CCTCATACCA AACCTTGGTG ATCTGAAAGA AAGGACCGGT
CTGGATGTCA AGGTTCTCGC CGCAGGCGGG AAAATCGATT TTCGCCGCGA TCACGTCGAC
CTTGCCGTGC GGCGCAACGA TTTTGCCATC GACCCCCGCC TGCATGTGAG GGAACTGGCG
CCGGAAGCGA TGGGAATGGT TTGCACGCCG CAGGTGGCGG CTGATCTCAA CAACGTACCT
CGCCCCAGCG TACCGGCCCT GCATACCCGC TCGCGTCCCG ATGCCTGGCT GAACTGGCGC
AAGACCCAGC CGGGAACCCG CAAGTTCAAC TCGGACATTT TTTACGAGCA TTTCTATCTG
GCCCTCGAGG CGGCGATGGC TGGCCAGGGT GTCGCGCTGG CATCGATCCA TATGGTGACG
ACGGATATGG CAGCCGGACG ACTGGCCGCA CTCGGTGCGT TTCATCAGGA TGGCACCCAT
TATCTCGCCG TCTCCAATAG CGATTTTGCC GCCGATGAAC GACGGCTGGT ATTCACCGAC
TGGCTGTCGC AACGCATGCG AGCCCATCTG GCGCAGGCAT CCACTGCGCG CCCGACCGCA
GAAACAAGGC ATCTGCCATA A
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| Protein sequence | MARLPQLGAL KAFSVAARYE SFVLAAQELH VTHGAISKQV KNLEESLGEP LFLRRNRAVF
LTERGRQLAA RLASVFQDLE NVVTDFRSNA YAQPLIVSCE PTLCLKFLIP NLGDLKERTG
LDVKVLAAGG KIDFRRDHVD LAVRRNDFAI DPRLHVRELA PEAMGMVCTP QVAADLNNVP
RPSVPALHTR SRPDAWLNWR KTQPGTRKFN SDIFYEHFYL ALEAAMAGQG VALASIHMVT
TDMAAGRLAA LGAFHQDGTH YLAVSNSDFA ADERRLVFTD WLSQRMRAHL AQASTARPTA
ETRHLP
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