| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1088 |
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| Symbol | |
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| ID | 7386169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 918129 |
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| End bp | 919829 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650573 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548781 |
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| Protein GI | 222147824 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGG ATGCTGCCGA TAAAGTCACT TCATCCTATG CCCAGGGTCT GTTTCAACAT
GCCCTCGATG AATTTGCCGC ACTCTTGCCG CCTGCCAGGC AAGATCCGCG AATGATCATC
ATGGCTGCCC AATGCCATTA TCGGCTTGGG CATTTCGAGA CGGCGGCGGA TCATTATACT
CTTGCAGCGG ACCTCGTTGC CACTGATGGC ATAAGGCTGA ACAAAGTTGC ATTCGAACTC
TATAAAAAGG CCGGGCATAC TGAAAAAGCC TTTGCCTCAG CCGAACGCAT ATTGCAGGTT
GAGCCGAGAG ACCATGCTGC CGCTATTTTT CGCCGGCATC ATTTGTTCGA TTTCCTAAGG
TTGGATGAGC TGAAAGCTGC CAATGATGCG GCATTACCGG CAATACAGGC GGGTGATGAA
TTTGCCATGT CCTGCGAACT GCCGTTCAAC ATTCTCCACT GGTGCAGCGA TGAGAGCATT
CAAGCCCGTA TCCTGGGCGA GGGCCGGCCA GATATATCGC CGCAGATCCG CGCAATGCGC
CGGCAAAAAC CACATGTCTT TGGTGACAAG ATCAGGATTG GCTATCTTTC CAACGATTTT
TTCAGTTCTC ATGCGACGAT GATCCTGTTG CAGGGCGTGC TTGAGCGCCA TGACAGAAGC
CGTTTCGAGA TTATCCTCTA TTGCTATTCA AACAAGGCAT TGGTCGAAAG CGACAACGGA
TCGCGCGCCC GCATGGGGAT GATCAAGCAA ATCGGCGACC TGTCTGATGC GGCGGCCAGC
ACGATGATCC AGAATGACGA CCTGGACATT CTTGTTGATC TGAAAGGCCA TACCAAGGAT
GCCAGAATAG GTCTGGTCAA TTCCGGCCTT GCGCCGATAC AGGTGGCCTG GCTTGGTTTT
CCGGGCAGCG GCATCGGCAT AGACTGTGAC TATATCATCG GCGATCCGAT TGTGACGCCT
CAGTCCAGCA AGCCGTTTTA CCAGGAAAAG TTTTGCCGTT TGCCGGAAAC CTATCAACCC
AATGACAATA TCAACCGGCC CTTGCCGCCA GCAGTGCCGC GAGCAGCTTT GGGCTTGCCG
CAGGACAGGT TCGTTCTGGC ATCCTTCAAC AGCATCAAGA AACTTAGCCC GCAAACTGTT
GAGGCATGGC TGAAGATCAT GGCGGATCTG CCGGACAGCA TCCTGTGGAT CCTGTGCAGA
AGCGACATTG CCAAGGACAA TCTCCGGACA CTGTTCGCGC GTCATGGCCT GTCAGCGGAA
CGACTGATTT TCACGCCGCC ACTTGCCTAC CCGTATCACC TCGCCAGGCT GTCCGCAGCA
GATCTTGTCC TCGACAGTTT TCCCTATTGT GGCCATACGA CCACATCCGA TTGCCTTTGG
GCCGGAGTGC CCGTTCTGGC GCTGAAGGGC CAGAATTTCG CCTCCCGCGT TTCTGAAAGC
CTGCTGACCG CCCTTGGCGT ACCGGAACTG GTGGCTGCGA CCGTTGATGA TTACATTGCC
CAGGCGCAAG ACCTTGCGCA CAACAGAAAC CGTCTTCAAG AATTGCGCGA CAGGATCGCC
GCCAACCGGC ACACCACGCC GCTGTTTGAC ACCGACCGCT TTACCCGCCA TCTCGAAGAC
GCCTACTGGA TGATGGTTGA GCGCGCCAAG GCCGGATTGG AGCCTGATCA CATGGATGTT
CCGGCAAGGC CGTTCCCATG A
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| Protein sequence | MTLDAADKVT SSYAQGLFQH ALDEFAALLP PARQDPRMII MAAQCHYRLG HFETAADHYT
LAADLVATDG IRLNKVAFEL YKKAGHTEKA FASAERILQV EPRDHAAAIF RRHHLFDFLR
LDELKAANDA ALPAIQAGDE FAMSCELPFN ILHWCSDESI QARILGEGRP DISPQIRAMR
RQKPHVFGDK IRIGYLSNDF FSSHATMILL QGVLERHDRS RFEIILYCYS NKALVESDNG
SRARMGMIKQ IGDLSDAAAS TMIQNDDLDI LVDLKGHTKD ARIGLVNSGL APIQVAWLGF
PGSGIGIDCD YIIGDPIVTP QSSKPFYQEK FCRLPETYQP NDNINRPLPP AVPRAALGLP
QDRFVLASFN SIKKLSPQTV EAWLKIMADL PDSILWILCR SDIAKDNLRT LFARHGLSAE
RLIFTPPLAY PYHLARLSAA DLVLDSFPYC GHTTTSDCLW AGVPVLALKG QNFASRVSES
LLTALGVPEL VAATVDDYIA QAQDLAHNRN RLQELRDRIA ANRHTTPLFD TDRFTRHLED
AYWMMVERAK AGLEPDHMDV PARPFP
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