| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1086 |
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| Symbol | |
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| ID | 7386167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 915517 |
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| End bp | 917415 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650571 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548779 |
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| Protein GI | 222147822 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCCGCTTT ATTTCCCATC TTCAACAGAT GGGAGACGGG TTTTGGCGGC TTTATACAGG
CAGGCACTGG AGCAATACGG GGAGGGCGCC TATGAGGCGG CCTTGACCAC CGTTTCGCGC
CTGTTGCAAG CCGAACGAAG CAATGCCGAC GCCCATATTC TCGCCGCCAC CGTGCATGAG
CGTCTCGGCA ATCGTCTTGA GGCGGCCGGA CTGTTTGAGC GTGTGATTGC GCTTACACCC
ACGCGCAAAC GTGATGTCGC TTTTCGCGCC TGCTCTCATT ATCTTGAATC CGGTCACGAC
GATCTGGCTC TACGTGCCTT GCTGGCGCTG CACCGCTATA TGCCTGACGA TGTCGATGCG
AATCATTCGA TTTGCAGCCT TTACCGCGAA GCGGGCCGCT ATCCGGAGGC GCTACCCTAT
GCGCTTAAGC TGGTAACGAT TGGCCGCGAT TTCGACAATT GGTTGAATGC AGGCATGGTG
CTGCTGGGGG CAGGGCAAGC GGAACAAGCA TTTGTCGTGC TGAAAGCGGC CTACAACGCC
CGTCCGACGG AACGGCTGGC GCTGACAGAG TTGTTCTGGT GCGCCATGAA CCTTTGCGAT
TTCGAGCTGG CCACGCGGCT ACAGGGGGAG CTTGAGGCTG CCTATGCTGC GGATGGCGCG
GTTCTGGACA TTCGCGAAAA CGTCTTCCGG GCGCTGCAAT GGTCTGGCGA TGAGGCCTAT
CATGTCCTGA GTGCGATCCG GACGGGGGAG AAGCATCGAG GCACGGTTGC TCTACGGCGG
CCTTATAAGG CCCGGTCCGG GCAAAGGCTG AGGGTCGGCT ATGTCTCAGC GGATTTATAC
CAGCATGCGA CGCTCTCGCT TTTAACCGGC GTGATCGAAA ACCATGATCG CGACCGTTTT
GAGATTTTCG GCATTTGCCA TACCGCAGCC AAGAACCGCA AGGGCATGCT GCGCCAACGT
TTCCTTGAGG CCATCGATCA CTATGTCGAC ATTCTTGACT TGGATGACGA TCAGGCCGCT
GCCGCCATAC GGCAGCTTGA TCTCGATATT CTGATCGACC TCAAGGGATT TACTTTCGAG
AACCGGCTGG GGATTTTCTG CCGCCGCCCG GCCCCTGTGC AGGTGGCCTA TCTCGGCTTT
CCAGGCAGTG TCGTCGGGGT TGGCATTGAT TATGCCATTG CCGATTCCAT TGTTGCCCCG
CCATCGTCGG ACCCGTTCTA TGCCGAGAAA ATCTTTCGGC TGCCCAATAG CTACCAGTGC
AATGACAATA GCCGTGAAAA GGTGATGCGC GACGGCCCGC GCAGCCTTCA CGGCTTGCCG
GAACAGGGTG TGGTGTTCTG TTCTTTCAAT CAAGCGGTGA AAATTCGATA TCAGGTGTTC
AAAACCTGGA TGGAAATCCT GAAATCGGTT GATGGGTCGG TGCTTTGGCT GATTGATATG
CTACCAGTGA CGCGAGACAA TCTTCGCGCC GCAGCTGTCC GGCTGGGAGT GGCGCCGGAG
AGATTGATTT TTGCGCCGAA AAAACCGCTC TCGGAGCATT TGCGCCGGTT GCCTTATGCT
GATATCGCCC TTGATACCGG GCCTTGTAAC GGCCATACGA CCACGGCGGA TGCCCTTTGG
GCCGGGGTGC CGGTTCTGAC CTGGAAAGGC ACGAATTTTG CCGGACGCGT CAGCGAAAGT
CTTTTGAGTG CCGTTGGCTT GACCGAGCTG GTCGCCGACG ATCTTACCGA ATTCGGCCGC
CTGGCGGTCG AACTGGCGCA GGATGAGGTC CGCCAATCTC ACCTGCGCCA GAACCTCCTT
CAAGCCCGTG ATACCGCGCC GCTGTTTGAT ACCCCCCGCT TCACCCGCGA TTTCGAAGCG
GCATTGGTGG CGATTTGCGT GGATGCCGCC AAGGGTTGA
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| Protein sequence | MPLYFPSSTD GRRVLAALYR QALEQYGEGA YEAALTTVSR LLQAERSNAD AHILAATVHE
RLGNRLEAAG LFERVIALTP TRKRDVAFRA CSHYLESGHD DLALRALLAL HRYMPDDVDA
NHSICSLYRE AGRYPEALPY ALKLVTIGRD FDNWLNAGMV LLGAGQAEQA FVVLKAAYNA
RPTERLALTE LFWCAMNLCD FELATRLQGE LEAAYAADGA VLDIRENVFR ALQWSGDEAY
HVLSAIRTGE KHRGTVALRR PYKARSGQRL RVGYVSADLY QHATLSLLTG VIENHDRDRF
EIFGICHTAA KNRKGMLRQR FLEAIDHYVD ILDLDDDQAA AAIRQLDLDI LIDLKGFTFE
NRLGIFCRRP APVQVAYLGF PGSVVGVGID YAIADSIVAP PSSDPFYAEK IFRLPNSYQC
NDNSREKVMR DGPRSLHGLP EQGVVFCSFN QAVKIRYQVF KTWMEILKSV DGSVLWLIDM
LPVTRDNLRA AAVRLGVAPE RLIFAPKKPL SEHLRRLPYA DIALDTGPCN GHTTTADALW
AGVPVLTWKG TNFAGRVSES LLSAVGLTEL VADDLTEFGR LAVELAQDEV RQSHLRQNLL
QARDTAPLFD TPRFTRDFEA ALVAICVDAA KG
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