Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1080 |
Symbol | |
ID | 7387159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 911855 |
End bp | 912544 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650567 |
Product | hypothetical protein |
Protein accession | YP_002548775 |
Protein GI | 222147818 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCT TCGACCTCAC CCTTTTCGAT TGTGACGGCG TGCTCGTCGA TTCCGAAATC ATTGCCGCAA AGGTGGAATC CAAGCTGCTG ACCGAGGCAG GCTATCCGAT TTCAGTCGAG GAAATGGGTG AGCGTTTTTC CGGCATGACC TGGAAAAACA TCCTGATGAC CATCGAGAAG GAAGTGGATA TTCCGCTCTC GGCCAGCCTG ATCGACAAAT CGGAAGCCCT GCTGGACCAG CGGCTGGCCC GCGAGGTCAA GCTGGTGGAA GGAGTCACCT ACGCCCTGTC ACGTCTGCAG GGGCCGCGCT GCATTTGCTC CAATTCCTCG TCACAGCGGC TGGACATGAT GCTGACCAAG GTCGGCCTCA AGGAGTTTTT CGCGCCGCAT GTCTATTCCG CCAAGGATCT CGGCGCGGAT CGGGTCAAGC CGAAGCCGGA TATCTATCTG CATGGCGCCG CCCAGTTCAA CGTCAAGCCG CAAAATTGCG TGGTGGTGGA AGACAGCGTG CATGGCATCC ATGCCGCCCG CGCCGCTGGA ATGCGGGTTG TCGGCTTTAC CGGCGCCTCC CACACCTACC CCTCCCATGC CGACCGCCTG ACCGAAGCCG GGGCCGAAAC CGTGATCGCC CGAATGATGG ACCTGCCAGC GGTCATAGAC GCCATGGCCG AATGGGACCA TGTGATCTAA
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Protein sequence | MAGFDLTLFD CDGVLVDSEI IAAKVESKLL TEAGYPISVE EMGERFSGMT WKNILMTIEK EVDIPLSASL IDKSEALLDQ RLAREVKLVE GVTYALSRLQ GPRCICSNSS SQRLDMMLTK VGLKEFFAPH VYSAKDLGAD RVKPKPDIYL HGAAQFNVKP QNCVVVEDSV HGIHAARAAG MRVVGFTGAS HTYPSHADRL TEAGAETVIA RMMDLPAVID AMAEWDHVI
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