Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1075 |
Symbol | thrC |
ID | 7387156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 908511 |
End bp | 909818 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650564 |
Product | threonine synthase |
Protein accession | YP_002548772 |
Protein GI | 222147815 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.515489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGCCCCGCG AATGGCCGAA AATGCGCAAG CGCGACATTC GGGCGCTGCG CGGCAAGACC TATCAGGAGG TCGCGTTTGC GGTGCTGAAA CCCTTCGTGG ACGGCGAAAT CAAGGATGAT GCCCTTCAGG CGATGATCCA TGACGCCTAT GCCACCTTCC GCCATCCTGC TGTCGCGCCT TTAGTGCAGA CCGGGCCGAA TTCCTATATT CTCGAACTGT TCCACGGCAC GACGCTGGCC TTCAAGGATG TTGCCATGCA ATTGCTTGGC CGGCTGATGG ATCACGTTCT GCGCGAGCGC GGACAGCGCG CCACCATTGT CGGCGCCACC TCGGGCGATA CAGGCGGGGC GGCCATCGAT GCCTTTGCCG GTCTTGATAA TATCGACATG TTCATTCTGT TTCCCAAGGG CAAGGTCTCA CCCGTGCAGC AGCGGCAGAT GACCACATCC AAGGCCGGGA ATGTCCGGGC GGTGGCCATC GAGGGCAATT TCGACGATTG CCAGGATCTG GTCAAAGCCA TGTTCAACCA TGTCGCTTTT CGCGACAAAG TACAGCTATC CGGCGTCAAT TCGATCAACT GGGCGCGAAT CATGGCCCAG GTGGTCTATT ACTTTACCGC TGCCCTTTCG CTGGGGGGAC CGGACCGCAA AATTTCCTTC ACCGTGCCGA CCGGCAATTT CGGCGATATT TTCGCGGGCT ATGTGGCGCG CGAAATGGGC CTGCCCATCG ATAAGCTGGT GATAGCCACC AATGATAACG ACATTCTGGC CCGCACGCTG AAAACCGGAC GCTACGAGAT GCGCGGTGTG ATGGCCACCA CCTCACCATC GATGGATATC CAGATCTCCT CGAATTTCGA GCGCCTGCTG TTTGAAGCCA GCGGCCGCAA TGCCGGTGAG ATCCGTTCGC AGATGGCGTC CCTCAAGCAA TCCGGCGCTT TCGAGATCAA GCCGGATGCG CTCAAAACCA TCCGCAAACT CTTCCGGGCC GGGCGCGCCA CCCAACAGGA CGTGGCCAAA ACCATCGCCA CCACTTTGGC TGAAACCGGC TATCTGCTTG ATCCCCATAC GGCTTGCGGC GTGGTGGTCG CATCGAAATT CGAAAAGCCG CAAAGCCCGA TGGTGACGCT GGCCACAGCT CATCCCGCCA AATTTCCGGC GGCGGTAAAA TCGGCATCGG GTATTGACCC CGCGCTTCCG ACGTGGCTTG CTGATCTCAT GGATAGGGAG GAGCGTTTCG ACGTCCTTGC TGGCGAGCTC GACGTAGTGG AGGCATTCAT CTCCGCTCAC TCGCGCGCCG GTGCTTAA
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Protein sequence | MPREWPKMRK RDIRALRGKT YQEVAFAVLK PFVDGEIKDD ALQAMIHDAY ATFRHPAVAP LVQTGPNSYI LELFHGTTLA FKDVAMQLLG RLMDHVLRER GQRATIVGAT SGDTGGAAID AFAGLDNIDM FILFPKGKVS PVQQRQMTTS KAGNVRAVAI EGNFDDCQDL VKAMFNHVAF RDKVQLSGVN SINWARIMAQ VVYYFTAALS LGGPDRKISF TVPTGNFGDI FAGYVAREMG LPIDKLVIAT NDNDILARTL KTGRYEMRGV MATTSPSMDI QISSNFERLL FEASGRNAGE IRSQMASLKQ SGAFEIKPDA LKTIRKLFRA GRATQQDVAK TIATTLAETG YLLDPHTACG VVVASKFEKP QSPMVTLATA HPAKFPAAVK SASGIDPALP TWLADLMDRE ERFDVLAGEL DVVEAFISAH SRAGA
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