Gene Avi_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1074 
Symbol 
ID7387155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp907186 
End bp908490 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content60% 
IMG OID643650563 
Productpeptidase family M16 
Protein accessionYP_002548771 
Protein GI222147814 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.261705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTG AGTGCACCCG CCTGCCTTCG GGGCTGACGG TCGTTACCGA AAAAATGCCG 
CATCTGGAAA GCGTCGCGCT GGGCGTCTGG GTTAAATCCG GTTCGCGCGA TGAAACCGCC
GAGGAACATG GCATTGCCCA TCTTCTCGAA CACATGGCTT TCAAAGGCAC GAAACGGCGC
AGCGCTCGCC AGATCGCCGA GGAAATCGAG AATGTCGGGG GCGAGCTGAA TGCCGCGACA
TCGACCGAGA CCACCTCCTA TTACGCCCGG GTTCTGAAGG ACGATGTGCC GCTGGCCGTC
GATATTCTTG CTGACATCCT CACTGATTCG GCCTTCGATG ACGAAGAGTT GATCCGTGAG
AAGCATGTGA TCCTGCAGGA AATCGGCGCT GCCTTCGATA CGCCTGATGA CGTTGTCTTC
GACCGTTTCG CCGAAACCGC CTTTCGCGAC CAGACGGTCG GACGCGGCAT TCTTGGCACG
CCACAAACGG TGGATGGTTT CACCAGCGAC CAGATTCGCG CCTATCTTGC CCGCAACTAT
ACCACCGACC GGATGTTCGT GGTGGCGGCT GGCGCCGTCG ACCATGAAAG CTTCGTGCGC
CAGGTGGAAG ACCGCTTCAG CACGCTGCGA ACCAAGCCCG CCGTCTCGCC GATCATCACC
CCTGCCCGCT ATACCGGCGG CGAGGTGCGC GAAAGCCGTG ACCTGATGGA CACCCAGCTT
TTGCTCGGTT TCGAAGGCCG CGCTTATCAT GCGCGCGATT TTTATGCCTC GCAGATTCTG
GCCAATATCC TCGGCGGCGG CATGTCCTCC CGGCTGTTTC AGGAAGTACG CGAGTTTCGC
GGTCTCTGTT ATTCGGTCTA TGCCTTTCAC TGGGGCTTTT CCGATACCGG CATTTTCGGC
ATTCATGCCG CGACCGGCGG CGAAAACCTG CCGGAACTGG TGCCTGTGAT CATCGACGAA
CTGCGCAAAT CGGCGGAACA GATCGAGCAG CAGGAAATCG ACCGGTCCCG CACCCAGATC
CGGGCGCAAT TGCTGATGGG TCAGGAAAGC CCTGCGGCGC GCGCCGGACA GATCGCCCGG
CAGATGATGC TCTATGGTCG ACCGATTTCC AATCCGGAAC TGATGGAACG GCTGGAAAGC
ATTACCGTCG ACCGGCTGAC GGACCTTGCC GGACGGCTGT TCTTCGACGG TAGCCCACCG
ACATTGTCAG CCATCGGCCC GCTCGAACAG CTGGCGCCCA TGGAAGACAT TCTTTCCGCC
CTTTCGGGGT CGCGCGACAC GGTGCTCAAG GCAGCACGCG GCTGA
 
Protein sequence
MNVECTRLPS GLTVVTEKMP HLESVALGVW VKSGSRDETA EEHGIAHLLE HMAFKGTKRR 
SARQIAEEIE NVGGELNAAT STETTSYYAR VLKDDVPLAV DILADILTDS AFDDEELIRE
KHVILQEIGA AFDTPDDVVF DRFAETAFRD QTVGRGILGT PQTVDGFTSD QIRAYLARNY
TTDRMFVVAA GAVDHESFVR QVEDRFSTLR TKPAVSPIIT PARYTGGEVR ESRDLMDTQL
LLGFEGRAYH ARDFYASQIL ANILGGGMSS RLFQEVREFR GLCYSVYAFH WGFSDTGIFG
IHAATGGENL PELVPVIIDE LRKSAEQIEQ QEIDRSRTQI RAQLLMGQES PAARAGQIAR
QMMLYGRPIS NPELMERLES ITVDRLTDLA GRLFFDGSPP TLSAIGPLEQ LAPMEDILSA
LSGSRDTVLK AARG