| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1074 |
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| Symbol | |
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| ID | 7387155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 907186 |
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| End bp | 908490 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650563 |
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| Product | peptidase family M16 |
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| Protein accession | YP_002548771 |
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| Protein GI | 222147814 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.261705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTG AGTGCACCCG CCTGCCTTCG GGGCTGACGG TCGTTACCGA AAAAATGCCG
CATCTGGAAA GCGTCGCGCT GGGCGTCTGG GTTAAATCCG GTTCGCGCGA TGAAACCGCC
GAGGAACATG GCATTGCCCA TCTTCTCGAA CACATGGCTT TCAAAGGCAC GAAACGGCGC
AGCGCTCGCC AGATCGCCGA GGAAATCGAG AATGTCGGGG GCGAGCTGAA TGCCGCGACA
TCGACCGAGA CCACCTCCTA TTACGCCCGG GTTCTGAAGG ACGATGTGCC GCTGGCCGTC
GATATTCTTG CTGACATCCT CACTGATTCG GCCTTCGATG ACGAAGAGTT GATCCGTGAG
AAGCATGTGA TCCTGCAGGA AATCGGCGCT GCCTTCGATA CGCCTGATGA CGTTGTCTTC
GACCGTTTCG CCGAAACCGC CTTTCGCGAC CAGACGGTCG GACGCGGCAT TCTTGGCACG
CCACAAACGG TGGATGGTTT CACCAGCGAC CAGATTCGCG CCTATCTTGC CCGCAACTAT
ACCACCGACC GGATGTTCGT GGTGGCGGCT GGCGCCGTCG ACCATGAAAG CTTCGTGCGC
CAGGTGGAAG ACCGCTTCAG CACGCTGCGA ACCAAGCCCG CCGTCTCGCC GATCATCACC
CCTGCCCGCT ATACCGGCGG CGAGGTGCGC GAAAGCCGTG ACCTGATGGA CACCCAGCTT
TTGCTCGGTT TCGAAGGCCG CGCTTATCAT GCGCGCGATT TTTATGCCTC GCAGATTCTG
GCCAATATCC TCGGCGGCGG CATGTCCTCC CGGCTGTTTC AGGAAGTACG CGAGTTTCGC
GGTCTCTGTT ATTCGGTCTA TGCCTTTCAC TGGGGCTTTT CCGATACCGG CATTTTCGGC
ATTCATGCCG CGACCGGCGG CGAAAACCTG CCGGAACTGG TGCCTGTGAT CATCGACGAA
CTGCGCAAAT CGGCGGAACA GATCGAGCAG CAGGAAATCG ACCGGTCCCG CACCCAGATC
CGGGCGCAAT TGCTGATGGG TCAGGAAAGC CCTGCGGCGC GCGCCGGACA GATCGCCCGG
CAGATGATGC TCTATGGTCG ACCGATTTCC AATCCGGAAC TGATGGAACG GCTGGAAAGC
ATTACCGTCG ACCGGCTGAC GGACCTTGCC GGACGGCTGT TCTTCGACGG TAGCCCACCG
ACATTGTCAG CCATCGGCCC GCTCGAACAG CTGGCGCCCA TGGAAGACAT TCTTTCCGCC
CTTTCGGGGT CGCGCGACAC GGTGCTCAAG GCAGCACGCG GCTGA
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| Protein sequence | MNVECTRLPS GLTVVTEKMP HLESVALGVW VKSGSRDETA EEHGIAHLLE HMAFKGTKRR
SARQIAEEIE NVGGELNAAT STETTSYYAR VLKDDVPLAV DILADILTDS AFDDEELIRE
KHVILQEIGA AFDTPDDVVF DRFAETAFRD QTVGRGILGT PQTVDGFTSD QIRAYLARNY
TTDRMFVVAA GAVDHESFVR QVEDRFSTLR TKPAVSPIIT PARYTGGEVR ESRDLMDTQL
LLGFEGRAYH ARDFYASQIL ANILGGGMSS RLFQEVREFR GLCYSVYAFH WGFSDTGIFG
IHAATGGENL PELVPVIIDE LRKSAEQIEQ QEIDRSRTQI RAQLLMGQES PAARAGQIAR
QMMLYGRPIS NPELMERLES ITVDRLTDLA GRLFFDGSPP TLSAIGPLEQ LAPMEDILSA
LSGSRDTVLK AARG
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