Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1074 |
Symbol | |
ID | 7387155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 907186 |
End bp | 908490 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650563 |
Product | peptidase family M16 |
Protein accession | YP_002548771 |
Protein GI | 222147814 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.261705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTTG AGTGCACCCG CCTGCCTTCG GGGCTGACGG TCGTTACCGA AAAAATGCCG CATCTGGAAA GCGTCGCGCT GGGCGTCTGG GTTAAATCCG GTTCGCGCGA TGAAACCGCC GAGGAACATG GCATTGCCCA TCTTCTCGAA CACATGGCTT TCAAAGGCAC GAAACGGCGC AGCGCTCGCC AGATCGCCGA GGAAATCGAG AATGTCGGGG GCGAGCTGAA TGCCGCGACA TCGACCGAGA CCACCTCCTA TTACGCCCGG GTTCTGAAGG ACGATGTGCC GCTGGCCGTC GATATTCTTG CTGACATCCT CACTGATTCG GCCTTCGATG ACGAAGAGTT GATCCGTGAG AAGCATGTGA TCCTGCAGGA AATCGGCGCT GCCTTCGATA CGCCTGATGA CGTTGTCTTC GACCGTTTCG CCGAAACCGC CTTTCGCGAC CAGACGGTCG GACGCGGCAT TCTTGGCACG CCACAAACGG TGGATGGTTT CACCAGCGAC CAGATTCGCG CCTATCTTGC CCGCAACTAT ACCACCGACC GGATGTTCGT GGTGGCGGCT GGCGCCGTCG ACCATGAAAG CTTCGTGCGC CAGGTGGAAG ACCGCTTCAG CACGCTGCGA ACCAAGCCCG CCGTCTCGCC GATCATCACC CCTGCCCGCT ATACCGGCGG CGAGGTGCGC GAAAGCCGTG ACCTGATGGA CACCCAGCTT TTGCTCGGTT TCGAAGGCCG CGCTTATCAT GCGCGCGATT TTTATGCCTC GCAGATTCTG GCCAATATCC TCGGCGGCGG CATGTCCTCC CGGCTGTTTC AGGAAGTACG CGAGTTTCGC GGTCTCTGTT ATTCGGTCTA TGCCTTTCAC TGGGGCTTTT CCGATACCGG CATTTTCGGC ATTCATGCCG CGACCGGCGG CGAAAACCTG CCGGAACTGG TGCCTGTGAT CATCGACGAA CTGCGCAAAT CGGCGGAACA GATCGAGCAG CAGGAAATCG ACCGGTCCCG CACCCAGATC CGGGCGCAAT TGCTGATGGG TCAGGAAAGC CCTGCGGCGC GCGCCGGACA GATCGCCCGG CAGATGATGC TCTATGGTCG ACCGATTTCC AATCCGGAAC TGATGGAACG GCTGGAAAGC ATTACCGTCG ACCGGCTGAC GGACCTTGCC GGACGGCTGT TCTTCGACGG TAGCCCACCG ACATTGTCAG CCATCGGCCC GCTCGAACAG CTGGCGCCCA TGGAAGACAT TCTTTCCGCC CTTTCGGGGT CGCGCGACAC GGTGCTCAAG GCAGCACGCG GCTGA
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Protein sequence | MNVECTRLPS GLTVVTEKMP HLESVALGVW VKSGSRDETA EEHGIAHLLE HMAFKGTKRR SARQIAEEIE NVGGELNAAT STETTSYYAR VLKDDVPLAV DILADILTDS AFDDEELIRE KHVILQEIGA AFDTPDDVVF DRFAETAFRD QTVGRGILGT PQTVDGFTSD QIRAYLARNY TTDRMFVVAA GAVDHESFVR QVEDRFSTLR TKPAVSPIIT PARYTGGEVR ESRDLMDTQL LLGFEGRAYH ARDFYASQIL ANILGGGMSS RLFQEVREFR GLCYSVYAFH WGFSDTGIFG IHAATGGENL PELVPVIIDE LRKSAEQIEQ QEIDRSRTQI RAQLLMGQES PAARAGQIAR QMMLYGRPIS NPELMERLES ITVDRLTDLA GRLFFDGSPP TLSAIGPLEQ LAPMEDILSA LSGSRDTVLK AARG
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