Gene Avi_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1071 
Symbol 
ID7387152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp902767 
End bp903450 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID643650560 
Producttranscriptional regulator ArsR family 
Protein accessionYP_002548768 
Protein GI222147811 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCTG AAATTGCCGC CCTGATGGGG GACCCGGCCC GCGCCAATAT GCTGATCGCC 
CTGATGGGCG GGCAGGCGTT GACTGCGGGC GAGTTGGCGC TGCATGGTGG CGTCAGCGCC 
CAGACCGCCA GTGGCCATCT GGCCAGGATG GTGGAGGGCC GTCTGCTGTC GGTCGAAAAA 
CAGGGCCGTC ACCGTTATTA CCGTTTGGCG GGACGCGCTG TCGCTGCGAC CATGGAGACG 
CTGATGTCGC TTGCCGCCGA TGGGCCACGG CGCCTGCATC CGGTCGGCCC GAAGGACTTG 
GCGTTACGCT CGGCGCGCAG CTGTTACGAT CACATCGCCG GTCGTCTCGG CGTGGCACTG 
GCCGATGGCT TGCAAACCAA GGCCTATATC GAACTGGGGG AGGAGGCTGT GACGCTGACG 
CCACCCGGCC AGCAGTTTTT CTGCGATTTC GGCATCGATC TTTCTCCATC CGCACCCCGC 
GGACGACCGT TCTGCCGCAC CTGCCTCGAC TGGAGCGAGC GTCGTCCGCA TTTGGCCGGA 
CGGCTGGGCG CAGCCATACT GGACAGGATG CTGGAACTGG GCTGGGTGGC GCGCCAGCCG 
CAGGGCAGGG CGCTGCGGAT CACACAGGCC GGACAGCAGG GCTTTCGGGC GCAATTCGGG 
GTTACGGAAG ACTGGATGGC GTGA
 
Protein sequence
MLAEIAALMG DPARANMLIA LMGGQALTAG ELALHGGVSA QTASGHLARM VEGRLLSVEK 
QGRHRYYRLA GRAVAATMET LMSLAADGPR RLHPVGPKDL ALRSARSCYD HIAGRLGVAL 
ADGLQTKAYI ELGEEAVTLT PPGQQFFCDF GIDLSPSAPR GRPFCRTCLD WSERRPHLAG 
RLGAAILDRM LELGWVARQP QGRALRITQA GQQGFRAQFG VTEDWMA