Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1070 |
Symbol | |
ID | 7387151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 901685 |
End bp | 902617 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650559 |
Product | hypothetical protein |
Protein accession | YP_002548767 |
Protein GI | 222147810 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC CGGTCCTTTT GAAAGAACTT GCCCTGCTTT TGGCTTTGGC AACAGTTTGG GGCGCTGCCT ATAGTTTCAT CCGCATTGGG GTGGAGACCA TTCCACCGAT CACGCTGATT GCCGCCCGTA CCCTGCTGGC CGGCGGGTTG TTGCTTACCA TTCTGTGGAT GCGCGGCATG ACACTGCCCC GCGACAGCGC CACCTGGCGG CGGTTCTTCA TCCAGTCCTG CCTCAACAGC GCCCTGCCCT TCACCCTGAT TGCCTGGGCG GAACTGCATG TCGAAGCAGG GCTTGCCGTG ATCCTCAATG CCTTGACGCC GATCTTCACC TTCCTGATCA CTGTCGCCTT CACCCGGCAT GAACACGTCG GCCTGCGCAA GCTGCTTGGC GTCTTGCTGG GGATTTCCGG CACCTGCCTG ATCGTCGGCT TCAACGCCTT TCATTCCGCC GGAACCGATC TCCTAGCGCA ATGCGCCGTC ATCCTGGCAT CGGCCTGCTA TGCGATGGCC GCGATTTTCG GACGGAATTT TAAGGGACTT GACCCGATGA TGCCCGCTAC CGGCTCGCTT TTGTGTGGGG CGGCCATGCT CATTCCGCTC AGTCTGGTCG TGGACAAGCC CTGGACGCTG GCGGTCTCCG CCTCTTCACT GGCAGCATTG CTGGCGCTCT CGGTGTTTTC CACCGCACTG GCATTTGTGA TCTATTTCCG GCTTGTTCAC ACGCTGGGCT CGGTCGCCAC CACATCCCAG GCCTATCTGC GGGTGCCGAT CGGGGTCGGC ATCGGCGCGA TTTTTCTTGG GGAACGCTAT AGCCCGACCG TGCTCGCCGG TCTCGTCCTG GTCGTGGCCG GTGTCATCGT CATGACCCTG CCCGCTTCGC TCAAGCTACC CCGCATCCTT CGCCCGCTAC GCCGAAAACC TCAGCAACCC TGA
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Protein sequence | MEKPVLLKEL ALLLALATVW GAAYSFIRIG VETIPPITLI AARTLLAGGL LLTILWMRGM TLPRDSATWR RFFIQSCLNS ALPFTLIAWA ELHVEAGLAV ILNALTPIFT FLITVAFTRH EHVGLRKLLG VLLGISGTCL IVGFNAFHSA GTDLLAQCAV ILASACYAMA AIFGRNFKGL DPMMPATGSL LCGAAMLIPL SLVVDKPWTL AVSASSLAAL LALSVFSTAL AFVIYFRLVH TLGSVATTSQ AYLRVPIGVG IGAIFLGERY SPTVLAGLVL VVAGVIVMTL PASLKLPRIL RPLRRKPQQP
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