Gene Avi_1069 details

Gene Information

• Locus tag: Avi_1069
• ID: 7387150
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 901079
• End bp: 901684
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643650558
• Product: hypothetical protein
• Protein accession: YP_002548766
• Protein GI: 222147809
• COG category: [K] Transcription
• COG ID: [COG1678] Putative transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.848418
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTTT CCACTTTGAA GTCTGATCGT GAACGTGGGT TTCTCGACGG CCATTTCCTG 
ATCGCCATGC CCGGCATGGC GGACGGCAAT TTTACCCGCA GTGTGGTCTA TGTCTGCGCC 
CATACGACGG CTGGCGCCAT GGGCTTCATC ATCAACCGCA CCCAGCCGGT CAAATTCGCC 
GATATCCTGC TGCATCTCGA CCTGATCGAC CAGAATGATG CGATCATGCT GCCGGACCAT 
GCCCGCAACT TCCCCATTCA ATGCGGCGGC CCGGTGGAAA CTGGCCGTGG CTTTGTGCTG 
CATTCCGACG ATTACCTGAG CGACAGCAGC ATTCCGGTCA GCGACGATAT TTCCCTGACC 
GCGACGCTCG ACATCGTCCG CGCCATTTCC GATGGACGCG GCCCGGCGCG CGCCACGATG 
CTGCTTGGCT ATGCCGGCTG GGGGCCGGGG CAGTTGGAGG CGGAAATCGC CAATAATGGC 
TGGCTGAACT GCCCGGCCTC CGAAGACCTG ATCTTCGATC CGGTCCTCGA CAACAAATAT 
GACCGGGCGC TGGCTCTGAT CGGCATCAGC CCCGCCACGC TTTCGGCAGA GGCCGGTCAC 
GCTTGA 

 

Protein sequence

MAFSTLKSDR ERGFLDGHFL IAMPGMADGN FTRSVVYVCA HTTAGAMGFI INRTQPVKFA 
DILLHLDLID QNDAIMLPDH ARNFPIQCGG PVETGRGFVL HSDDYLSDSS IPVSDDISLT 
ATLDIVRAIS DGRGPARATM LLGYAGWGPG QLEAEIANNG WLNCPASEDL IFDPVLDNKY 
DRALALIGIS PATLSAEAGH A