| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1062 |
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| Symbol | |
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| ID | 7387145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 896502 |
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| End bp | 897398 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650553 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002548761 |
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| Protein GI | 222147804 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.861783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCGTA AACTGTTATT GTCCGCAGCC CTGCCACTGC TGATGGTGCT GTCTACCGCA
CCAGCCTTTG CCGACACACT GAAGGTTGTC GCGTCCTTCA CTGTGTTGGC CGATGTCGTC
AAACAGGTTG GCGGCGATCA TGTCACCGTC TCCAGCCTGG TTGGCCCCGA TGGCGACCCC
CATGAATTCG AGCCGTCGCC AGCCAATGCC AAGGCTCTGA AGGCCGCCGA TGTGACATTC
GTGTCCGGTG AAGGCCTGGA AGGCTGGATG GACCGGCTGA TCACCGCCTC CGGCTACAAG
GGCAAGCCGG TCGTCGCTTC CGAGGGCATC AACACCCGCA CCATGGAAGA GGATGGCAAG
ACCGTGACCG ATCCGCATGT GTGGAACAGC CCGGTCAATG TGAAGGTCTG GGTCGCCAAT
ATCGAAAAGG CGCTGACTGC TGCCGATCCC GCCGATGCCG AAGCCTTCAA GGCCAATGCG
AGCGCCTACA CGAAAAAGCT TGAAGACATG AATGCCTATG CTCATGCCAA GTTTGACAAC
ATCCCTGAAT CGGAGCGCAA GATCCTCACC AGCCACGACG CCTTCGGGTA TCTGGGCCGC
GAATACAAAA TCAGCTTCCT GTCGCCACTC GGTCTTTCCA CCGAAAGCGA AGCCTCTGCC
GCCGATGTCG CCAAACTGAT CGAGCAGATC AAGACCGAGC ATGTGAAGAG CTATTTCTTC
GAAAACTCCA ACGATCCGCG TCTCGTCAAG CAGATCGCCA AGGCAACCGG CGCGACATCC
GGGGGTGAGC TTTATGTGGA AGCTCTGTCC AAGCCCAAGG GCCCGGCTTC GAGCTATGAG
AAAATGTTCC GCTACAATGT CGACAAGCTG GCCGATGCCA TGCGCAAATC AAGCTGA
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| Protein sequence | MNRKLLLSAA LPLLMVLSTA PAFADTLKVV ASFTVLADVV KQVGGDHVTV SSLVGPDGDP
HEFEPSPANA KALKAADVTF VSGEGLEGWM DRLITASGYK GKPVVASEGI NTRTMEEDGK
TVTDPHVWNS PVNVKVWVAN IEKALTAADP ADAEAFKANA SAYTKKLEDM NAYAHAKFDN
IPESERKILT SHDAFGYLGR EYKISFLSPL GLSTESEASA ADVAKLIEQI KTEHVKSYFF
ENSNDPRLVK QIAKATGATS GGELYVEALS KPKGPASSYE KMFRYNVDKL ADAMRKSS
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