Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1046 |
Symbol | |
ID | 7387133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 886453 |
End bp | 886833 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643650541 |
Product | hypothetical protein |
Protein accession | YP_002548749 |
Protein GI | 222147792 |
COG category | [S] Function unknown |
COG ID | [COG5349] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.52629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGCA ATAGCGATTT CCCGCCGGTC GAACCGGTCC AGGCCGCCCT TTCGGTTTCC TGCCCGCGTT GCGGACGTGG CAAACTTTTT CAGGGACTGA CCAAGCTGAA ACCCGCCTGT AGCGCATGCG GCTTCGATTA CAGCAGCATC GATCCCGGCG ATGGGGCGTC GATTTTCGTT ATTCTGATCG CCGATTTTCT GGTGGTTGGC CTGGCGCTTT ACACGGAGGT CACGTATTCG CCGGGATTGT GGGTCCATTT TCTGATCTTT GGACCTTTGG CGATCGGATT GTCGCTCTGG CTGTTGCGCA CCATCAAGGC GCTGTTGATT GCCTTGCAAT ACAAGCACAA TGCCCATCCG GGCCAGATCG ACCGGGAGTA G
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Protein sequence | MASNSDFPPV EPVQAALSVS CPRCGRGKLF QGLTKLKPAC SACGFDYSSI DPGDGASIFV ILIADFLVVG LALYTEVTYS PGLWVHFLIF GPLAIGLSLW LLRTIKALLI ALQYKHNAHP GQIDRE
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