| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1036 |
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| Symbol | tldD |
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| ID | 7387125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 877954 |
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| End bp | 879369 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650533 |
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| Product | TldD |
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| Protein accession | YP_002548741 |
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| Protein GI | 222147784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG ACCTCATCAG CCTGTTCGAT TGTGACGAGC GCAGCCTGTC AAAAGCCGTC
GCCTCGGCGC TGGAGGGATC GGATGACGGC GAATTGTATA TTGAACATGC CCAGGCCGAA
TCACTTTCCT TCGACAATGG CCGCCTGAAA GGCGGCAGTT TCAACACCGA CCAGGGGTTT
GGTCTGCGCT CAGTGGCCGG GGAAGCGGTG GGCTACGCCC ATTCCGGTGA ATTGTCGCTA
TCGGCACTCA ATCGCGCCGC CGATGCGGTC AAGGCCGTTA CCTATGGCTA TAGCGGCTCC
TATGCCAGCG CCCCACAGCG CACCAATGTC CGGCTTTATG GCGACGAAAA CCCGATCGGT
AGCCCGACAT TCGAGGAAAA AGTAGCGCTT CTTTCGGAAA TCGATGCCTA TCTGCGCGCC
AAAGACCCGA AGGTACGACA GGTCTCCGCC TCGATTGCCG CCAGCTGGCA GGTGGTGGAA
ATCCTGCGCG CCGATGGCCA CCGCGTCCGC GATGTGCGCC CGATGACGCG CATGAATATC
TCGGTCATCA CCGGCCAGGG CGAGCGGCAG GAATCCGGCT CCTTCGGCAC AGGCGGACGG
ATGTCCTTCG CCGACTTCCT CAGCGACGAG AGCTGGAAAG CGGGCGCCGA TGACGCGCTG
CGTCAGGCGC TGGTCAATCT GGAGGCCATT GAGGCCCCGG CTGGCAGCAT GGACGTTGTG
CTGGGCAATG GCTGGCCGGG CGTGATGCTG CACGAAGCCG TCGGCCACGG GCTGGAAGGC
GATTTCAATC GCAAGAAAAC CTCGGCCTTT GCCGGATTGC TGGGCGAAAT GGTTGCCGCA
CCTGGCGTGA CCGTGGTTGA TGATGGCACG ATCAATAACC GGCGCGGCTC GATCACTGTC
GATGACGAAG GCACGCCTTC CGCCTATAAC GTGCTGATCG AAAATGGTCG GCTGGTCGGC
TATATGCAGG ATCGCCAGAA TGCCCGGCTG ATGGGCATGA CACCAACCGG CAATGGCCGC
CGCCAGGGCT ATGCCCACCA GCCGATGCCC CGCATGACCA ATACCTACAT GCTGTCTGGC
GATAAGAGCC CGGAAGAAAT CATCGCCTCG GTCAAGAAGG GCATCTATGC CGTGTCTTTC
GGTGGTGGCC AGGTGGATAT CACCTCGGGC AAATTCGTGT TCGGCTGCAC CGAAGCCTAT
ATGATCGAGG ATGGCAAGAT CGGAGCACCA GTCAAGGGCG CCATGCTGAT CGGCAACGGG
CCGGACGCGA TGAAGCGGGT ATCGATGATC GGCAACGACA TGAAACTCGA TACCGGCATC
GGCAATTGCG GCAAGGCTGG ACAGTGGGTC CCGGTCGGCG TTGGCCAGCC GCATCTGCGG
ATGGACCAGA TCACGGTGGG TGGTACGCGG GCGTAA
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| Protein sequence | MTTDLISLFD CDERSLSKAV ASALEGSDDG ELYIEHAQAE SLSFDNGRLK GGSFNTDQGF
GLRSVAGEAV GYAHSGELSL SALNRAADAV KAVTYGYSGS YASAPQRTNV RLYGDENPIG
SPTFEEKVAL LSEIDAYLRA KDPKVRQVSA SIAASWQVVE ILRADGHRVR DVRPMTRMNI
SVITGQGERQ ESGSFGTGGR MSFADFLSDE SWKAGADDAL RQALVNLEAI EAPAGSMDVV
LGNGWPGVML HEAVGHGLEG DFNRKKTSAF AGLLGEMVAA PGVTVVDDGT INNRRGSITV
DDEGTPSAYN VLIENGRLVG YMQDRQNARL MGMTPTGNGR RQGYAHQPMP RMTNTYMLSG
DKSPEEIIAS VKKGIYAVSF GGGQVDITSG KFVFGCTEAY MIEDGKIGAP VKGAMLIGNG
PDAMKRVSMI GNDMKLDTGI GNCGKAGQWV PVGVGQPHLR MDQITVGGTR A
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