| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1030 |
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| Symbol | |
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| ID | 7387120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 873937 |
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| End bp | 875265 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650528 |
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| Product | D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) |
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| Protein accession | YP_002548736 |
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| Protein GI | 222147779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.448702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGA CCCTGATCGC GCTATCGTTG TTTGTGTCGA TCAGCATGAT GGCCAGCCCG
GTTCTTGCAG GCAGCGCCCA GCTTCTGCTG GATGCGCGCA CCGGTCGGGT GATCGCCTCG
GAAAATGCGG ATATGCCCAA CCATCCGGCA TCGCTGACCA AGATGATGAC CATCTATATG
GTTTTCGATG CGATTCGCCG TGGCACGTTG AGCTGGGATA GCCCCGTGCC CTTTTCCAAA
TACGCCTCAT CACGTCCGCC CACCAAGCTT CGCCTCAAGC CGGGTGAAGA AATTACCGTA
CGCGAGGCGG TGCTGGGCAT GGTGACCCTG TCGGCTAATG ATGCCGCCGC CGCAATGGCC
GAAAAGCTCG GCGGGACGGA AGAGAATTTC GCGGCGATGA TGACCGCCAA GGCGCGCCAG
CTCGGCATGC CCAATACCAC ATTCGTCAAT GCCTCCGGCC TTCCAGACGA TCGGCAGATC
ACCACCGCCC GCGACATGTC CACCCTCGGC GTAGCACTGC TGCGCGACTT TCCCCGCGAT
TACGCGCTGT TTTCCACCCG CAGCTTTGCC TTTCGTGGCC GCACCATCAA TGGCCATAAC
AATCTCATGT ACCGCTACAA GGGCATGGAC GGCATCAAGA CCGGTTACAC CAACGCATCC
GGCTATAATC TGGTCAGCGC CGTGGCCGAT GGCAAGCGCC GGGTGATCGG CGTGATCATG
GGCGGCCGTA GCGGCGCCAG CCGTGACAAT CTGATGGCGC AGCTGATCAC CAAGAATATC
GGTAAGGCAT CCGACGGCAA TTCGCTGATC GCCAGCGCTG CTCCGACCGC TCCTATTGTC
ATTGCCCAGA CCACTGGCAG CATTCCCTTG CCGCTCGACC GCAGCGCCCC AATCGACCGC
AGAGAGGTTG CTTCTCAGGT CGCCTCCGTC AGCGCGCAGG CCGATGCGCC GGTTCTCGGC
TCCCGCTTTG GCAATGCTTA TGCCGGTGGT GGCGCCAACA ACGCTGCCGC AGCCACGGAA
GCCCTGATTG CGGGCGCCCA TCCGCGTCCC CTGAAGCCCA TTCCGCTGCA TCGCGACGGA
ACCTGGCAAA TCCAGATTGC GGCTGCCGCC AGCGCCGAAG AAGCCATGAG CCTGCTGCAA
ATGGTCCGCG ACAAGATCGG TGGGCCGCTG GCCGACCGCG ATATCTATAC CGAAGCCGTC
ACCCGCAATG GCGCCACCGT GTACCGCGCC CGCTTCACCG GCTTTCCCAA CAAGGACGAT
GCTCAAAGCG CCTGTGAGCG GCTGGTGAAA AGCAGCTATG ATTGCGTGCT GATGCCAGCG
CGAGGCTAA
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| Protein sequence | MSRTLIALSL FVSISMMASP VLAGSAQLLL DARTGRVIAS ENADMPNHPA SLTKMMTIYM
VFDAIRRGTL SWDSPVPFSK YASSRPPTKL RLKPGEEITV REAVLGMVTL SANDAAAAMA
EKLGGTEENF AAMMTAKARQ LGMPNTTFVN ASGLPDDRQI TTARDMSTLG VALLRDFPRD
YALFSTRSFA FRGRTINGHN NLMYRYKGMD GIKTGYTNAS GYNLVSAVAD GKRRVIGVIM
GGRSGASRDN LMAQLITKNI GKASDGNSLI ASAAPTAPIV IAQTTGSIPL PLDRSAPIDR
REVASQVASV SAQADAPVLG SRFGNAYAGG GANNAAAATE ALIAGAHPRP LKPIPLHRDG
TWQIQIAAAA SAEEAMSLLQ MVRDKIGGPL ADRDIYTEAV TRNGATVYRA RFTGFPNKDD
AQSACERLVK SSYDCVLMPA RG
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