Gene Avi_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1013 
Symbol 
ID7387107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp858819 
End bp859397 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content58% 
IMG OID643650515 
Producthypothetical protein 
Protein accessionYP_002548723 
Protein GI222147766 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTGA AGCTTTATCT CGCCGGTCCC GAAGTGTTTC TGGCCGATGC CCGCGAAGTG 
CTCGATGCCA AGGCGGCGAT GACACGGGCC TATGGGTTCG AGCCGATCTG CCCCGGCGAT 
ATTTCCATTG AACCGGCCCC GACCTTGCAT GCGTTCGGGT TGAAAATCAG TGCCGTCGAT 
GAGGATATGA TGAACCGGGC CGATGGGGTG ATCGCCAATC TCACCCCATT TCGTGGCATT 
GCCGCCGATC CCGGCACGGC TTTCGAGCTG GGCTATATGT GCGCGCAGGG CAAGCTCGTC 
GCTGCCTATA CCAACATCAC CGACAATCAC TATGCCCGCA CCGCCGGATT TTATCAGGGC 
AAGGTGACGC TCGGTCCTGA TCAGCGCAAG CGCGGGCCGG ATGGTCTGTC ATTGGAGGAT 
TTCGATATGA TCGAAAATCT TATGCTGCAT GGCGGGGTCG AACGCCGTGG CGGGCCGATT 
TTTACCCATC AGGCGCAAGC CGATCAGCTC TATAGCGACC TGACGGCTTT CGAGCTTTGC 
CTGAAGGCAC TGTCGGCGAA GCTTCCCACC GTAGTATAG
 
Protein sequence
MSLKLYLAGP EVFLADAREV LDAKAAMTRA YGFEPICPGD ISIEPAPTLH AFGLKISAVD 
EDMMNRADGV IANLTPFRGI AADPGTAFEL GYMCAQGKLV AAYTNITDNH YARTAGFYQG 
KVTLGPDQRK RGPDGLSLED FDMIENLMLH GGVERRGGPI FTHQAQADQL YSDLTAFELC 
LKALSAKLPT VV