| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0976 |
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| Symbol | |
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| ID | 7387078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 824487 |
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| End bp | 825458 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643650486 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548694 |
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| Protein GI | 222147737 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGC GTCTCTCCGT CATCACATCC CCCGAACCGG CCATCCGCGC CGCCCTGCCC
CTGCTAGAGG CCGGGGAAGT CATCGCCATG CCGACAGAAA CCGTCTATGG GCTGGCGGCG
GATGCCACCA ATCCGCAGGC CATCACCCGA ATTTACGAGA CCAAGGGCCG CCCGCAGTTC
AATCCGCTGA TCTGCCATGT CGCCGATCTC GCCATGGCCG AGCACTACGG CGTCTTCGAT
CCCTTGTCGC GGCAATTGGC GGAGCGGTTC TGGCCGGGGC CGCTAACGCT GATCGTGCCG
CTTGCCCCAG ACTGCGCCAT ACATCCGCTG GCAACGGCCG GGCTGGACAC GGTTGGCCTG
CGCATGCCCC TGGGCTTTGC CGCAGAGCTG ATTGCCGCCT TCGGCAAGCC GCTGGCCGCC
CCAAGCGCCA ATACGTCGGG CAAGATCAGC CCGACCACGG CTGCCCATGT CGAGGAGGAT
CTGGGGGCGA AAATCCCGCT GATCCTCGAT GCCGAAGCGG CGGGTGTCGG GGTCGAATCC
ACCATTCTGA AGGTAGAAGA CGGCCAGATC CAGCTGCTGC GGCCCGGCGG GCTTTCAGTA
GAGGCGGTGG AAGAGGCGAC AGGATTGCGG GTGATCCGCC CGCAAAAGGC GGGTGCGATC
ATCGAGGCGC CGGGCATGTT GGCCTCCCAT TATGCCCCGG AGGCTGCTGT CCGGCTGAAT
GTAACCTCGG TTTATGCCGA TGAGGCGGTG ATCACTTTTG GCTCCGCCGT CCCGCAAGGG
CTTGAAAAGG CTGCCCTCGT GCTCAATTTG AGTGCTAGCG GCGACCTTAC TGAAGCCGCC
GCCAATCTGT TCAGCTTCAT GAAGCGGGCC GATGCCAGCG GCGCTGCCCG CATTGCCTTC
ACCGCCATTC CCACCCATGG ATTGGGAGAC GCGATCAATG ACCGGCTGGA GCGGGCCGCT
GCACCACGAT GA
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| Protein sequence | MAQRLSVITS PEPAIRAALP LLEAGEVIAM PTETVYGLAA DATNPQAITR IYETKGRPQF
NPLICHVADL AMAEHYGVFD PLSRQLAERF WPGPLTLIVP LAPDCAIHPL ATAGLDTVGL
RMPLGFAAEL IAAFGKPLAA PSANTSGKIS PTTAAHVEED LGAKIPLILD AEAAGVGVES
TILKVEDGQI QLLRPGGLSV EAVEEATGLR VIRPQKAGAI IEAPGMLASH YAPEAAVRLN
VTSVYADEAV ITFGSAVPQG LEKAALVLNL SASGDLTEAA ANLFSFMKRA DASGAARIAF
TAIPTHGLGD AINDRLERAA APR
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