Gene Avi_0969 details

Gene Information

• Locus tag: Avi_0969
• ID: 7387752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 817616
• End bp: 819799
• Gene Length: 2184 bp
• Protein Length: 727 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 643650480
• Product: hypothetical protein
• Protein accession: YP_002548688
• Protein GI: 222147731

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.685924
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTCTA CTTATATCGG TTATGATCTT GTCAATCGCG ATATGAAAGC GAGCCTGAAG 
CGTGTGTCTC AGGAGCCTGA GGTGGCCCGC GAGCAGAAAT ATTACCAGGA GAATATCGGC 
AAGGTCAAAA CCGTCGACGA CTTCATGAAC GACGACCGGC TCTACCAATA TACGATGAAG 
GCCAACGGCC TGGAAGACAT GACCTATGCC AAGGCCTTCA TGAAGAAGGT GCTGGAAAGC 
GATCTGTCCG ACGAAGACAG CTATGCCAAC AAACTGGCCG ACGACCGTTA CCGCGATTTT 
GCCCGGTCCT TCAATTTTTC CGCCGAGACC GCCGATATCC AGACCGACAA GCAGGAAGAG 
GATGTGATTG GCCTTTACAA GCAATCGCTT GTCACCGAAG GCGACGATGC CAAGGAAGAG 
GTGCAATATT ACGATTCCGC TATCGACAAG GTCACCAATG TCGATGACCT CTTGAAGAAC 
AGTCGCCTGA CCAAATTCGT GCTGGAATCC TATGGGCTCG ACACCAAATA TTATTCCACC 
GACCATTTGA AAAAGGTCCT GACCAGCGAT GTCAACGACA GTACCAGTTA CGTCAATACG 
CTGACCACCA ACAAGTCGGA TTACGTGAAT ATCGCCAAAG CATTTTCCTT CAATACCGAC 
GGTTCGCTGA AAAATGCCAC GGCCCAGACC TCCGATCAGA AAACGGCGAT GGAAGATCTT 
TATCTGGAGG AAGTCCCCAG CACCGAGACC GCCTACCAGG CCGAGCGCGA AGCCGCCTAC 
TACAAGGAAA AGATCGCCAC TGTCACCAAG GCCTCGGATA TAACAGGGGA TTCGCGGCTG 
TTCAGCTATG TGAAGACAGC GCTGGGCATG GACAAGAACA CGCTGAAATC CACCTTTGAG 
AATATCGTCA CCAGCGATCT CAACGATGCC AACAGCTATG CCAATACCCA GGGCAAGGTG 
AAGGGAGAGT ACGCCAAGAT CGCCGCGATG TTTAACTTCG ACACCAGCGG TAATGCCACC 
GCGGGTAACG CCCAGAGCGA GACCCAGCTT TCCCAGACGG CGACTGCCTA CATGACCAAT 
TACGATGACG AGGACCAGGC CAATCTCAGT TCCCTGACCA CCTATTATTC CACGCAGATG 
AAATCCATTA CCAAGGTTGA TGACCTGCTC GGCAATGAGA AAATCTACGA TATGGTCATG 
AAGGCCTATG GTATCGAAAC GGACGAGTTT TCCAAGGCGG ACCTGAAAAA GGTTCTGACC 
AGCGATATGA ATGATCCCAA GAGCTATGCC AACAAGACCA GGGATGAGCG GCTGATCAGC 
CTGGCTTCCG CCTTCAATTT CAAGGAGGAT GGGACCGCTG ACGTGCCGCT TCTGGCCCAA 
TCGGAGCGCA CCATTACCGA AGTGGCCAAG GATTATATCG TCCAGAAGAC CCGCTTTCTC 
GAAGGCAAGG AGCAGACCGA CGCCAAGACC GCGGCGGAGG AGGATTCGAA ATATTACCAG 
GAAAACATCG TCAAGGTGTC ATCCGTCACG GATTTGCTCA AGGATCGCAA ACTGGTGGAT 
TTTGCCCTGA CAGCGCAGGG GCTTGACCCG AAAGATGTCA GCGACGACAT GCTCAAGCAG 
TTGTTTTCAT CTGATCTCAC CGATCCGAAG AGCTTTGCCA ACACCCAGGC CGACGAGGGC 
TATGCGAAAT TCGTCGCCTC CTATAATTTT GACAGTAGCG GCAAGATTTC CCAGGAAAAT 
GCCGATGGTG TGCAGAACCG CAGTGAGACC TTTAACACCG AAAATCTCTA TCTGCACCAG 
ACCCTTGAAA ACGAACAGGG CGAAAGCGAT CAGGGTGTGC GCCTTGCCCT TTACTGGGAT 
CGCATGTCGT CGACCATTAC CTCGGCCTAT GACATTCTCG GCGATACAGC GCTGCTGGAA 
GTGTTCCGCA CCGCCTATAG CCTGCCCAGC GACATGAGCA ATATGGATAT CGAGCAGCAG 
AAAAAGGTCA TTGAGAAGAA AATGGACCTG AAGGATCTGA GTGATCCTGA AAAGCAGAAG 
AAATTCCTGC AACGCTTTAC GGCCATGTAC GATCTGGAGA ACAATACCGG CTCCTCGGCC 
AATGCCGCGC TGACCATTCT CGGCGGCAGC TCTTCGACCA GCGGTATCAG TGCCAGCCTG 
CTGGAATCTG TCAACAGCCT GTAA 

 

Protein sequence

MVSTYIGYDL VNRDMKASLK RVSQEPEVAR EQKYYQENIG KVKTVDDFMN DDRLYQYTMK 
ANGLEDMTYA KAFMKKVLES DLSDEDSYAN KLADDRYRDF ARSFNFSAET ADIQTDKQEE 
DVIGLYKQSL VTEGDDAKEE VQYYDSAIDK VTNVDDLLKN SRLTKFVLES YGLDTKYYST 
DHLKKVLTSD VNDSTSYVNT LTTNKSDYVN IAKAFSFNTD GSLKNATAQT SDQKTAMEDL 
YLEEVPSTET AYQAEREAAY YKEKIATVTK ASDITGDSRL FSYVKTALGM DKNTLKSTFE 
NIVTSDLNDA NSYANTQGKV KGEYAKIAAM FNFDTSGNAT AGNAQSETQL SQTATAYMTN 
YDDEDQANLS SLTTYYSTQM KSITKVDDLL GNEKIYDMVM KAYGIETDEF SKADLKKVLT 
SDMNDPKSYA NKTRDERLIS LASAFNFKED GTADVPLLAQ SERTITEVAK DYIVQKTRFL 
EGKEQTDAKT AAEEDSKYYQ ENIVKVSSVT DLLKDRKLVD FALTAQGLDP KDVSDDMLKQ 
LFSSDLTDPK SFANTQADEG YAKFVASYNF DSSGKISQEN ADGVQNRSET FNTENLYLHQ 
TLENEQGESD QGVRLALYWD RMSSTITSAY DILGDTALLE VFRTAYSLPS DMSNMDIEQQ 
KKVIEKKMDL KDLSDPEKQK KFLQRFTAMY DLENNTGSSA NAALTILGGS SSTSGISASL 
LESVNSL