| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0962 |
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| Symbol | |
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| ID | 7387746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 810063 |
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| End bp | 812375 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650474 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548682 |
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| Protein GI | 222147725 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.607537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACG ATATCAAATC CATTGCCGCA CTGATTGCGA GCGAGATCAA TGCCCGAGCC
GATCAGGTGA TCTCCGCGGT GGATTTGCTG GATGGCGGTG CCACGGTTCC CTTCATCGCC
CGCTACCGCA AGGAAGTCAC CGGTGGGCTG GATGATACGC AATTGCGCAA TCTGGCCGAG
CGCTTGACCT ATCTGCGCGA GCTTGGTGCG CGCCGCAAGG CGATTGTCGA GAGCATCACA
TCACAAGACA AGATGACCGA TGAACTGGCC ATCAAGATTG CCCGCACCAC CACCAAGGCG
GAGCTGGAAG ACATCTATCT GCCCTACAAG CCCAAGCGCC GCACCCGCGC CGAGATTGCC
CGCGAAAAAG GCTTGGAGCC GCTGGCCAAT GCGATTTGGG AAGACCGGAC CAGCGATCCG
GCCAGGCTGG CAGAGGCCTA TGTGAAGGGC GAAGTGGCAG ACGTCAAAGC GGCACTGGAA
GGCGCGCGCG ATATCGTGGC CGAAGCCATG GCGGAAAATG CCGACCTGTT GAAGAGCCTG
CGCAATTATT TGAAAGACAA GGCCATTCTC TATGCCAAGG TGGTCGAAGG TAAGCAGGCG
TCTGGCGAGA AATTCGCTGA TTATTTCGAC CATTTCGAGC GCTGGGCCAC CGTGCCGGGT
CATCGGGCCT TGGCCATGCT GCGTGGCTGG AACGAAGAGA TTTTGACGCT GACCATCGAG
GCGGACAAGG ACGACACCTC ACTGATCAAG CCAACCCACC GGATGATTGC GTCAGCCTAT
CAGATTGGCC AAAAAGGCCC CGCTGATCAA TGGCTGATGG AGGTAGCGGG CTGGACCTGG
CGGGTGAAAC TGTCCATGTC GCTGTCACTG GACTTGATGC GCGATTTGCG TGAGCGGGCC
GAAGAAGAAG CGATCCACGT TTTTGCCCGC AATCTCAAGG ATTTGCTGCT GGCGGCCCCC
GCCGGTTCGC GCCCCACCAT GGGACTTGAT CCGGGTATCC GCACCGGCGT GAAAGTGGCG
GTGGTGGATG GCACCGGCAA GGTGCTGGAA ACCACGACGG TCTATCCTTT CCCACCGAAA
AACGACATTC GCGGCACCCA GGCCGAGCTG GCGGGCCTGA TCCGCAAGCA TGGCGTTGAC
CTGATCTCCA TCGGCAATGG CACTGGCAGC CGCGAGACGG AAAAGCTGGT GGCCGATATG
CTGACGCAAT TGCCCGCGAC CGGCAAGAAG CCCACCAAGG TCATCGTCTC GGAAGCAGGC
GCGTCGGTCT ATTCGGCGTC AGAACTGGCC GCCAAGGAAT TCCCCAATCT CGATGTCTCC
TTGCGCGGGG CCGTGTCCAT TGCCCGTCGC TTGCAGGATC CATTGGCGGA ATTGGTGAAG
ATTGATCCGA AATCCATCGG CGTTGGCCAG TATCAGCATG ATGTCGATCA GGGCCGTCTA
GGCCGTTCGC TGGATGCCGT GGTTGAAGAT GCGGTGAATG CGGTGGGTGT CGATCTCAAC
ACCGCATCGG CTCCGCTTCT GGCGCGAGTG TCGGGGTTGG GCGGCTCGAT AGCCGAAGCA
ATCGTTGCGC ATCGTGACCA GACCGGGCCG TTTTCCAGCC GCAAGGATCT GTTGAAAGTG
GCCCGGCTGG GTGCGCGCAC GTTTGAGCAA TGCGCCGGAT TCCTGCGCAT TCCCGATGGC
AAGGAGCCGC TGGATGCTTC GTCTGTTCAC CCGGAAGCTT ATGGGGTTGC CAAGAAAATC
GTTGCGGCCT GCGGGCGAGA TCTGCGCACG TTGATGGGCG ACAGCAGCCT GTTGAAAGGG
TTGGACCCGC GCCAGTTCGT TGATGAGCAA TTCGGTCTGC CCACGGTGAA GGACATTCTG
GCTGAGCTGG AAAAGCCGGG CCGTGACCCA CGCCCCAGCT TCAAGACTGC CATCTTTGCC
GATGGGGTGG AGGAAATCAC CGACCTGAAA CCCGGCATGT TGCTGGAAGG CACGGTCACC
AATGTCGCGG CCTTCGGGGC CTTTGTCGAT ATTGGCGTGC ATCAGGATGG CTTGGTGCAT
GTGTCGCAAT TGGCCGACAA ATTCGTCAAG GACCCGCATG AAGTGGTGAA AGCCGGTGAT
GTGGTGAAAG TCCGGGTGGT GGAAGTGGAT GTGAAGCGCA AGCGCATTGC GCTGACCATG
CGCAAGGATG GTGGCGAAGC GCCGCCGCCA TCGGCTCGTG ACAATCGTGG CCCGGCGGTG
ATGCGCAATG TCAATCCGAA ACCGGCCCGT GATGAAAAGC CCGCGATGGG TGGCTTGGGT
GCGGCACTGG CCGAGGCGAT GCGTAAGAAA TAA
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| Protein sequence | MADDIKSIAA LIASEINARA DQVISAVDLL DGGATVPFIA RYRKEVTGGL DDTQLRNLAE
RLTYLRELGA RRKAIVESIT SQDKMTDELA IKIARTTTKA ELEDIYLPYK PKRRTRAEIA
REKGLEPLAN AIWEDRTSDP ARLAEAYVKG EVADVKAALE GARDIVAEAM AENADLLKSL
RNYLKDKAIL YAKVVEGKQA SGEKFADYFD HFERWATVPG HRALAMLRGW NEEILTLTIE
ADKDDTSLIK PTHRMIASAY QIGQKGPADQ WLMEVAGWTW RVKLSMSLSL DLMRDLRERA
EEEAIHVFAR NLKDLLLAAP AGSRPTMGLD PGIRTGVKVA VVDGTGKVLE TTTVYPFPPK
NDIRGTQAEL AGLIRKHGVD LISIGNGTGS RETEKLVADM LTQLPATGKK PTKVIVSEAG
ASVYSASELA AKEFPNLDVS LRGAVSIARR LQDPLAELVK IDPKSIGVGQ YQHDVDQGRL
GRSLDAVVED AVNAVGVDLN TASAPLLARV SGLGGSIAEA IVAHRDQTGP FSSRKDLLKV
ARLGARTFEQ CAGFLRIPDG KEPLDASSVH PEAYGVAKKI VAACGRDLRT LMGDSSLLKG
LDPRQFVDEQ FGLPTVKDIL AELEKPGRDP RPSFKTAIFA DGVEEITDLK PGMLLEGTVT
NVAAFGAFVD IGVHQDGLVH VSQLADKFVK DPHEVVKAGD VVKVRVVEVD VKRKRIALTM
RKDGGEAPPP SARDNRGPAV MRNVNPKPAR DEKPAMGGLG AALAEAMRKK
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