| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0927 |
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| Symbol | |
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| ID | 7387720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 781357 |
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| End bp | 783261 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650448 |
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| Product | potassium uptake protein |
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| Protein accession | YP_002548656 |
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| Protein GI | 222147699 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3158] K+ transporter |
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| TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.137865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGG AAAACACCCA CGCAGCACCG GCCGAAAAGA AAGACCTGCG CAGCCTGATG
CTGCTGGCGC TCGGTTCGGT CGGCGTCGTC TACGGCGATA TCGGCACAAG CCCGCTCTAT
GCGTTTCGCG AGGCGCTGAA GCCAATTGCC CATGACGGCA TTACCCGTTT CGAGGTGATC
GGCCTGACTT CGCTGATCGT CTGGACGCTG ACGATCATCG TCACGCTGAA ATATGTGCTG
TTTCTGCTGC GCGCCGACAA TGACGGCGAA GGCGGCACCC TGTCGCTGCT GGCCCTGCTC
AGCAAGTCGG CCGGGCGTCA TACCGTCGTG CTGATGGTGC TGGGCCTGGT CGGGGCGGCG
CTGTTTCTGG GCGATGCCAT GATCACGCCT GCACTGTCGG TTCTGTCGGC GGTGGAAGGC
TTGAAACTGG TGGCGCCGCA ATCCTCCGGC TTTATCGTGC CGATCTCGGT GGTGATCCTG
ATCGTGCTGT TTGCCGTGCA GTCGCGCGGT ACGGGCGCGG TCGCCAATTT CTTCGGGCCG
ATCACCGTGG TCTGGTTCCT GGTGATGGCG GCAGGCGGTA TCGGCCATAT TTTCGACGAT
CCGGCGATTT TCCGGGCCTT CAATCCGATT CATGCCGTGA CCTTCCTGTT TCAGGAGAAA
TTTCTCGGTT TCGTCGTGCT GGGCGCGGTT TTCCTGACCG TCACCGGCGC CGAAGCACTC
TATGCCGACC TTGGCCACTT TGGCCGTCGT CCGATCCAGT GGGCGTGGTT CGTGCTGGTG
TTTCCGGCTC TGGTGCTTAA CTATCTCGGC CAGGGCGCGC TGGTGCTGAA GGACCCGGCC
ATGGCATCGG ACCCTTTCTA TCTGATGTTT CCAAGCTGGG CCATCCTGCC GGTCATCATC
CTGGCGACGG CGGCCACCGT TATTGCCAGC CAGGCGGTGA TAACAGGGGC GTTTTCCATG
GTGCGTCAGG CCATCCATCT AGGCTTCCTG CCGCGCATGG AGATCCTGTT CACCTCGGAA
ACCAATACCG GACAGATCTA TCTTCCTGCC GTCAACACGC TGCTGCTGCT TGGCGTTCTC
AGCCTGGTGC TACTGTTTGA AAGCTCCGAC GCGCTGGCCA CCGCCTATGG TATTTCCGTC
ACCGGCGCCA TGGTCGTCAC GACAATCATG GCGTTTGAAT TCGTGCGCAA GAAGTGGAAA
TGGTCGGTTT TCGTGGCGCT GCTGGTGATC GTACCGCTTC TGGCTCTGGA AACGGTTTTC
CTCGGCGCCA ACCTGCTGAA GATCCACGAT GGCGGCTATA TTCCGGTGCT GTTCGCGGCT
GGCTTCACCA TCGTCATGTG GACATGGCGG CGTGGAACGG CCATCCTGTT TGCCAAGACC
CGCCATGCCG ATATTCCGCT GTCCTCGTTC ATTTCCTCGG TGGAGCGCAA GAGCGAGCAT
GCGCCGGTCT GTGTGCCGGG GACGGCAATT TTCCTGACCA GCGACCCGGA AACGGCGCCT
GCTGCCCTGC TGCATAATCT CAAGCACAAC CACGTTCTGC ATGAGAAAAA CATCATCCTG
ACCATCAAGA CCGTCAACCG GCCCCGCGCC AGCGAAGCGG AACGCTTCGT GGCCGAGAGC
CTGTCGGAGC GGTTCAGCCG GGTGGAGATC CGCTTCGGCT ATATGGAACA GCAGAATGTG
TCGCAGGCGC TGGCCAAACT GCGCAAGGGC GGCCTGAAAT TCGACATCAT GTCCACCTCC
TTCTATCTCG GCCGCCGCAA GCTCGTGCCG GACGCCAAGG CAGGCATGCC AAACTGGCAG
GACAGGCTGT TCATCGCGCT GGCCAATTCG GCAACCGACC CCTCGGATTA CTTCCGGCTT
CCGGCCAATC GTGTCGTCGA ACTTGGCTCG CATGTGATCA TCTGA
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| Protein sequence | MSQENTHAAP AEKKDLRSLM LLALGSVGVV YGDIGTSPLY AFREALKPIA HDGITRFEVI
GLTSLIVWTL TIIVTLKYVL FLLRADNDGE GGTLSLLALL SKSAGRHTVV LMVLGLVGAA
LFLGDAMITP ALSVLSAVEG LKLVAPQSSG FIVPISVVIL IVLFAVQSRG TGAVANFFGP
ITVVWFLVMA AGGIGHIFDD PAIFRAFNPI HAVTFLFQEK FLGFVVLGAV FLTVTGAEAL
YADLGHFGRR PIQWAWFVLV FPALVLNYLG QGALVLKDPA MASDPFYLMF PSWAILPVII
LATAATVIAS QAVITGAFSM VRQAIHLGFL PRMEILFTSE TNTGQIYLPA VNTLLLLGVL
SLVLLFESSD ALATAYGISV TGAMVVTTIM AFEFVRKKWK WSVFVALLVI VPLLALETVF
LGANLLKIHD GGYIPVLFAA GFTIVMWTWR RGTAILFAKT RHADIPLSSF ISSVERKSEH
APVCVPGTAI FLTSDPETAP AALLHNLKHN HVLHEKNIIL TIKTVNRPRA SEAERFVAES
LSERFSRVEI RFGYMEQQNV SQALAKLRKG GLKFDIMSTS FYLGRRKLVP DAKAGMPNWQ
DRLFIALANS ATDPSDYFRL PANRVVELGS HVII
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