| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0926 |
|---|
| Symbol | corA |
|---|
| ID | 7387719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 780400 |
|---|
| End bp | 781341 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643650447 |
|---|
| Product | magnesium/cobalt transport protein |
|---|
| Protein accession | YP_002548655 |
|---|
| Protein GI | 222147698 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.449871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGC CCAGCGATGC GCCAGCGGTG CTGGACAAAG ATGTTCTATG GCTCGATCTT
CTCAATCCTG ACAGGACAGA GGAGGCTTTG GCCGAACGCT TGCTGGGCCT GCCGCTTCCC
ACCCGTGACG ACCTAAAGGA TATCGAGCCC TCCAGCCGAT TGTATATGGA CGATCATGGC
GTTTACATGA CCGCATCGCT GCTCTGTAAG GCCGAATCGG ACCTGCCGCA TCTGGCGGAT
GTCGCCTTCA TTCTGGGCGG AGGGCGTCTG GTCACCGTGC GCTACGCCGA GCCCCGTGCC
TTTGGCCTGT TTACCGCAGC CCTCAGCCGC AATCAGGCCC ATTGCACCTC CAACGCTGTC
ATGCTGGCGC GTCTTTTGGA AACGGTGGTC GACCGCACCG CCGAAATTCT GGAAATTGCC
GGTATGCGGG TCGATGCGCT GTCCGGCGAT GTGTTCGTCG ATCGCAGCCG GACCAAGCGC
CGGGCGGCGC GCTTTCTGGA GGACCGGCTG TTCGATATCG CCAGCCATCA TCGGCTGGTC
AGCAAGACGC GCGACAGCCT GGCATCGCTG TCGCGGCTGT CGTCCTTCCT GCTGTCGGTG
GAACCGGTCA AGTCCAATGC GCAAGCCCGC GACCTCTGTC AGGTCGTCGC CCATGATATT
CAATCCCTGT CCGAACATGC CGGTTTCATC GCCAGCAATA TCAGTTTCAT GCTTGATGCC
TCGCTTGGTC TGATCAATGT CGAACAGAAT TCGATCATCA AGATTTTCTC GATTGCATCG
GTGGTGTTTT TGCCGCCGAC GCTGGTCGCT TCCATCTATG GAATGAACTT TCAGGTCATG
CCGGAGTTGA CGTGGCTGCT TGGCTACCCA TTTGCTCTGA TCGTCATGGT TCTGTCCGCG
ATCATTCCCT TCCTGTTCTT CCGCTCGAAA GGCTGGCTCT GA
|
|---|
| Protein sequence | MILPSDAPAV LDKDVLWLDL LNPDRTEEAL AERLLGLPLP TRDDLKDIEP SSRLYMDDHG
VYMTASLLCK AESDLPHLAD VAFILGGGRL VTVRYAEPRA FGLFTAALSR NQAHCTSNAV
MLARLLETVV DRTAEILEIA GMRVDALSGD VFVDRSRTKR RAARFLEDRL FDIASHHRLV
SKTRDSLASL SRLSSFLLSV EPVKSNAQAR DLCQVVAHDI QSLSEHAGFI ASNISFMLDA
SLGLINVEQN SIIKIFSIAS VVFLPPTLVA SIYGMNFQVM PELTWLLGYP FALIVMVLSA
IIPFLFFRSK GWL
|
|---|
| |