Gene Avi_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0923 
Symbol 
ID7387718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp778842 
End bp780002 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content61% 
IMG OID643650446 
Productmrp protein 
Protein accessionYP_002548654 
Protein GI222147697 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCG ATAAAAACAC TGTTCTTGAA GCTCTGAAGA CGGTGCGCGG CCCCGATCTC 
GAAGGCAATA TTGTCGATCT GGGCATGGTA TCGGACGTGT TCATTTCCGA CGCCAAGGTC
TATCTCTCCA TTAATGTTCC GGCGGAGCGC GCCCGGGAGC TGGAGCCTTT GCGCCAGGCG
GCGGAGCGCA GTGTCAAGGC GCTTGCCGGC GTCAAGGGAG CGCTTGTCAG CCTGACAGCC
GAGCGCAAGG CCGGATCGCC ATCGACGCCG CCTGCACCCT CGGCCACCAG TCCTTCCCAT
TCCCATTCAC ACGGACATTC TCATGCACCA GCTCCAAGCC AGCCGGCCCG CCCGGCCAAG
GCTGGCATTC CCGGCATCGG CGCCATCATC GCGGTGGCTT CCGGCAAGGG TGGCGTCGGC
AAATCCACCA CGGCGGTCAA TCTGGCTCTG GCCTTGCTGG CCAATGGCTT GAAGGTCGGC
ATTCTCGATG CCGATGTCTA TGGTCCGTCG ATGCCGCGCC TGCTTGGCAT TTCCGGGCGA
CCGCAGCAGA TCGATGGGCG CATTATCGTG CCTATGGAAA ATTATGGCCT GAAGGCGATG
TCCATCGGCT TTCTGGTGGA TGAGGGCACC GCGATGATCT GGCGCGGCCC GATGGTACAA
TCGGCCCTGA TGCAGATGTT GCGCGAAGTG GCCTGGGGCG AGCTGGACGT GCTGGTGGTC
GATATGCCGC CCGGCACGGG CGATGCGCAA TTGACCATGG CCCAGCAAGT GCCGTTGAGT
GGTGCGGTGA TCGTCTCCAC CCCGCAGGAC CTGGCGCTGA TCGATGCCCG CAAGGGTATC
AATATGTTCA AGAAGGTCGA AGTGCCGGTG CTCGGCGTCA TCGAGAACAT GAGCTATTTC
ATCGCTCCCG ATACCGGCGC CCGTTACGAT ATTTTCGGTC ATGGTGGCGC CAAAGCCGAA
GCCGAAGCCA TTGGTGCGCC ATTCCTGGGT GAAGTGCCGT TGACCATTTC CATCCGCGAA
CATTCCGATG CAGGCACCCC GGTCGTGGTT TCCGAGCCGG AGAGCCCCCA GGCGCTGGTG
TACCGTGAGA TCGCCACCCG CGTCTGGCGC GAGGTCGAAC GGCATTCAAC AAGACAGGCG
CCGACCATTA CCTTTGAATG A
 
Protein sequence
MTLDKNTVLE ALKTVRGPDL EGNIVDLGMV SDVFISDAKV YLSINVPAER ARELEPLRQA 
AERSVKALAG VKGALVSLTA ERKAGSPSTP PAPSATSPSH SHSHGHSHAP APSQPARPAK
AGIPGIGAII AVASGKGGVG KSTTAVNLAL ALLANGLKVG ILDADVYGPS MPRLLGISGR
PQQIDGRIIV PMENYGLKAM SIGFLVDEGT AMIWRGPMVQ SALMQMLREV AWGELDVLVV
DMPPGTGDAQ LTMAQQVPLS GAVIVSTPQD LALIDARKGI NMFKKVEVPV LGVIENMSYF
IAPDTGARYD IFGHGGAKAE AEAIGAPFLG EVPLTISIRE HSDAGTPVVV SEPESPQALV
YREIATRVWR EVERHSTRQA PTITFE