| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0916 |
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| Symbol | |
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| ID | 7387715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 774518 |
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| End bp | 775399 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650443 |
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| Product | calcium-binding protein regucalcin |
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| Protein accession | YP_002548651 |
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| Protein GI | 222147694 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.722719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAACAG CGTATTCCGG CACCGTCCTG GTCGATACCC GCCTGCATCT GGGTGAAGGC
CCGACCTATG ACGTCGCGCG TGACACCGCC TGGTGGTTCG ACATTCTCGG CAAGGGGCTG
ATCGAGCATC GGTTTGCCAC GGGCGAGACG ATCCGCCACG ATCTGCCGAT GATGGCCAGC
GCGTTGGCGA CGATCGATGC TGAACGCCAG ATGCTGGCGA CGGAACAGGG TATTTTCATC
CGCGCCATTG CCAGCGGCGA ACTGACTTTG CTGACTGCGC TGGAACCGGA ACGGCCCGGC
AATCGCTCCA ATGACGGGCG GGTCCATCCT TGCGGTGCAC TGTGGATAGG CACGATGGGC
AAGACGGCAG CCGATGGGGC TGGTGCGATC TATCATGTGG CGGGCGACAA GGTGACTCGT
CTTTATGATA GCATCAGCAT TCCCAACGCC ATCTGTTTTT CGCCGGATGG AAGCCTCGGT
TACTATGTCG ACACGCGGGT CAATACGCTG ATGAAGGTCA GTCTCGATCC GGCAACCGGC
CTTCCGACCG GGACGCCATC CGTCCATATC GACGGACGCG GCAAGGATGG TGGCATCGAC
GGTGCGGTCT GCGATGCCGA GGGCGGCTTG TGGAATGCCC GTTGGGGCGT TGGCGCCGTC
GATCACTACG ATAGAACAGG ACAGCACCTG GCGCGCTACC GGCTTCCCGC TGCCCAAACC
ACCTGCCCGG CCTTTATCGG TGCCAAGGCC GACCGCCTGT TGGTCACCTC CGCCACCGAA
GGGCTCGACG CCGATGGCCT GGCCGCCGAT CCCCATGGTG GCAAGACCTT CGTCCTCGAT
ATCGCGGTCA AGGGCAGACA CGAGCCAAGC TTCCGCTTGT AA
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| Protein sequence | MQTAYSGTVL VDTRLHLGEG PTYDVARDTA WWFDILGKGL IEHRFATGET IRHDLPMMAS
ALATIDAERQ MLATEQGIFI RAIASGELTL LTALEPERPG NRSNDGRVHP CGALWIGTMG
KTAADGAGAI YHVAGDKVTR LYDSISIPNA ICFSPDGSLG YYVDTRVNTL MKVSLDPATG
LPTGTPSVHI DGRGKDGGID GAVCDAEGGL WNARWGVGAV DHYDRTGQHL ARYRLPAAQT
TCPAFIGAKA DRLLVTSATE GLDADGLAAD PHGGKTFVLD IAVKGRHEPS FRL
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